RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 GASTP01350 101 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 CD55P08174 381 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 KITLGP21583 273 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 TUBG1P23258 451 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 COX10Q12887 443 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 HNRNPA0Q13151 305 aaKnown RBP11.77□□□□□ -0.53
APOC1-208ENST00000592535 ZMAT1Q5H9K5 638 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 Q6ZR03 302 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 GLCCI1Q86VQ1 547 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 LINC00346Q8IVM7 164 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 LINC00471Q8N535 108 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 GJC3Q8NFK1 279 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 OR52L1Q8NGH7 329 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 OR8D4Q8NGM9 314 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 CCL17Q92583 94 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 CLPTM1LQ96KA5 538 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 DCLRE1CQ96SD1 692 aaKnown RBP11.77□□□□□ -0.53
APOC1-208ENST00000592535 DIRC2Q96SL1 478 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 COQ7Q99807 217 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 HDHD2Q9H0R4 259 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 TUBG2Q9NRH3 451 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 PTTG3PQ9NZH4 202 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 ZDHHC8Q9ULC8 765 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 PRPF19Q9UMS4 504 aaKnown RBP11.77□□□□□ -0.53
APOC1-208ENST00000592535 DNHD1Q96M86 4753 aa11.77□□□□□ -0.53
APOC1-208ENST00000592535 BHLHE40O14503 412 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 UBOX5O94941 541 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 MSMBP08118 114 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 TNFAIP6P98066 277 aaPredicted RBP11.76□□□□□ -0.53
APOC1-208ENST00000592535 CDK5R2Q13319 367 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 SLC18B1Q6NT16 456 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 RPL13AP3Q6NVV1 102 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 CFAP77Q6ZQR2 320 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 RASSF6Q6ZTQ3 369 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 CYB561A3Q8NBI2 242 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 AQP11Q8NBQ7 271 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 PTP4A1Q93096 173 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 TMEM186Q96B77 213 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 CCDC124Q96CT7 223 aaKnown RBP11.76□□□□□ -0.53
APOC1-208ENST00000592535 HAVCR1Q96D42 359 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 COG8Q96MW5 612 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 DDOQ99489 341 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 EGLN1Q9GZT9 426 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 ZNF665Q9H7R5 613 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 HIF1ANQ9NWT6 349 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 MRPL22Q9NWU5 206 aaKnown RBP11.76□□□□□ -0.53
APOC1-208ENST00000592535 DCAF16Q9NXF7 216 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 TAS2R1Q9NYW7 299 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 IL20Q9NYY1 176 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 SAMHD1Q9Y3Z3 626 aaKnown RBP11.76□□□□□ -0.53
APOC1-208ENST00000592535 U3KQV3 271 aa11.76□□□□□ -0.53
APOC1-208ENST00000592535 J3QW42 95 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 DEAF1O75398 565 aaPredicted RBP11.75□□□□□ -0.53
APOC1-208ENST00000592535 HLA-DQA2P01906 255 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 RAC2P15153 192 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 PYCR1P32322 319 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 THBS2P35442 1172 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 GGT2P36268 569 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 SRP14P37108 136 aaKnown RBP11.75□□□□□ -0.53
APOC1-208ENST00000592535 RBMXP38159 391 aaKnown RBP11.75□□□□□ -0.53
APOC1-208ENST00000592535 RGS6P49758 472 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 SRSF2Q01130 221 aaKnown RBP11.75□□□□□ -0.53
APOC1-208ENST00000592535 HLXQ14774 488 aaPredicted RBP11.75□□□□□ -0.53
APOC1-208ENST00000592535 RSPO1Q2MKA7 263 aaPredicted RBP11.75□□□□□ -0.53
APOC1-208ENST00000592535 SLC36A3Q495N2 470 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 FAM98BQ52LJ0 330 aaKnown RBP11.75□□□□□ -0.53
APOC1-208ENST00000592535 OR2T5Q6IEZ7 315 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 PHC2Q8IXK0 858 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 OR5AS1Q8N127 324 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 OR2Z1Q8NG97 314 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 OR2T29Q8NH02 315 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 OR51F2Q8NH61 342 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 SPATA3Q8NHX4 192 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 ZNRF4Q8WWF5 429 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 RAB1CQ92928 201 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 APOBEC3DQ96AK3 386 aaPredicted RBP11.75□□□□□ -0.53
APOC1-208ENST00000592535 ASB9Q96DX5 294 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 TIMD4Q96H15 378 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 REEP1Q9H902 201 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 TBC1D23Q9NUY8 699 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 COL6A5A8TX70 2615 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 ARHGAP32A7KAX9 2087 aa11.75□□□□□ -0.53
APOC1-208ENST00000592535 SOX14O95416 240 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 IGHV2-5P01817 119 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 PCMT1P22061 227 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 SLC3A1Q07837 685 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 MICAQ29983 383 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 KRTAP27-1Q3LI81 207 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 ZNF362Q5T0B9 420 aaPredicted RBP11.74□□□□□ -0.53
APOC1-208ENST00000592535 OR2T2Q6IF00 324 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 ACSM5Q6NUN0 579 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 LYPD4Q6UWN0 246 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 FBXW12Q6X9E4 464 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 ZNF771Q7L3S4 317 aaPredicted RBP11.74□□□□□ -0.53
APOC1-208ENST00000592535 SLC37A3Q8NCC5 494 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 OR5L1Q8NGL2 311 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 OR2AJ1Q8NGZ0 328 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 OR4Q3Q8NH05 313 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 ITLN1Q8WWA0 313 aa11.74□□□□□ -0.53
APOC1-208ENST00000592535 TMEM158Q8WZ71 300 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms