RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 NKIRAS2Q9NYR9 191 aa8.07□□□□□ -1.12
BRCA1-226ENST00000591534 TREM2Q9NZC2 230 aa8.07□□□□□ -1.12
BRCA1-226ENST00000591534 GLTPQ9NZD2 209 aa8.07□□□□□ -1.12
BRCA1-226ENST00000591534 PDP1Q9P0J1 537 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-226ENST00000591534 MED31Q9Y3C7 131 aa8.07□□□□□ -1.12
BRCA1-226ENST00000591534 LYVE1Q9Y5Y7 322 aa8.07□□□□□ -1.12
BRCA1-226ENST00000591534 MALRD1Q5VYJ5 2156 aa8.07□□□□□ -1.12
BRCA1-226ENST00000591534 YLPM1P49750 1951 aaKnown RBP8.06□□□□□ -1.12
BRCA1-226ENST00000591534 IGKV1D-42A0A075B6H8 117 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 A0A0B4J2E0 115 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 A0A1B0GX12 115 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 TMEM89A2RUT3 159 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 C17orf100A8MU93 164 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 M0R3H8 397 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 DENRO43583 198 aaKnown RBP8.06□□□□□ -1.12
BRCA1-226ENST00000591534 SERPINI2O75830 405 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 BGLAPP02818 100 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 ALPLP05186 524 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 LCKP06239 509 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 IGFBP1P08833 259 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-226ENST00000591534 HLA-DOBP13765 273 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 FPR2P25090 351 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 PEX2P28328 305 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 OR1E2P47887 323 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 SLC9A3P48764 834 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 ZNF84P51523 738 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 BIDP55957 195 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 HILS1P60008 231 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 SLC3A1Q07837 685 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 RAB39AQ14964 217 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 HFEQ30201 348 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 NRN1LQ496H8 165 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 ENTPD8Q5MY95 495 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 PHYHD1Q5SRE7 291 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 RBMS3Q6XE24 437 aaKnown RBP8.06□□□□□ -1.12
BRCA1-226ENST00000591534 MBOAT2Q6ZWT7 520 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 PEG10Q86TG7 708 aaKnown RBP8.06□□□□□ -1.12
BRCA1-226ENST00000591534 RBM45Q8IUH3 476 aaKnown RBP8.06□□□□□ -1.12
BRCA1-226ENST00000591534 C1orf174Q8IYL3 243 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 BPIFB2Q8N4F0 458 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 SEMA6DQ8NFY4 1073 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 OR52L1Q8NGH7 329 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 OR6T1Q8NGN1 323 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 VANGL1Q8TAA9 524 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-226ENST00000591534 NANPQ8TBE9 248 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 GNPDA2Q8TDQ7 276 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 TRUB1Q8WWH5 349 aaKnown RBP8.06□□□□□ -1.12
BRCA1-226ENST00000591534 SLC25A44Q96H78 314 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-226ENST00000591534 TXNDC15Q96J42 360 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 Q96MT0 163 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 KCNJ15Q99712 375 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 JAM3Q9BX67 310 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 ZNF665Q9H7R5 613 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 NTN4Q9HB63 628 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 NANSQ9NR45 359 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 TAAR3PQ9P1P4 343 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 NKX1-2Q9UD57 310 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-226ENST00000591534 BAIAP2Q9UQB8 552 aa8.06□□□□□ -1.12
BRCA1-226ENST00000591534 IGHV1-69-2A0A0G2JMI3 117 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 PLSCR5A0PG75 271 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 CLDN25C9JDP6 229 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 LRRN3E7EW58 273 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 EI24O14681 340 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 RNF13O43567 381 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 MPZL1O95297 269 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 SNAP29O95721 258 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 IGHG1P01857 330 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 THY1P04216 161 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 NR2C1P13056 603 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 ZNF250P15622 560 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 ZNF26P17031 533 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-226ENST00000591534 APLNRP35414 380 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 LIPAP38571 399 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 CAPGP40121 348 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 CRYBB2P43320 205 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 ERFP50548 548 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 CDC42P60953 191 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 LMO4P61968 165 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 CCL8P80075 99 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 ZP4Q12836 540 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 TOP3AQ13472 1001 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-226ENST00000591534 KIR3DS1Q14943 382 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 MAD2L1BPQ15013 274 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-226ENST00000591534 LRRC36Q1X8D7 754 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 DCAF12L2Q5VW00 463 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 FAHD1Q6P587 224 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 SLC35D2Q76EJ3 337 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 SLC16A14Q7RTX9 510 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 LRP11Q86VZ4 500 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 WDFY1Q8IWB7 410 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 SKA3Q8IX90 412 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 CLDN22Q8N7P3 220 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 TMEM54Q969K7 222 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 ELMOD3Q96FG2 381 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 ZNF75AQ96N20 296 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 MOGAT1Q96PD6 335 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 EGLN1Q9GZT9 426 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 CYSLTR2Q9NS75 346 aa8.05□□□□□ -1.12
BRCA1-226ENST00000591534 EIF3KQ9UBQ5 218 aaKnown RBP8.05□□□□□ -1.12
BRCA1-226ENST00000591534 FZR1Q9UM11 496 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms