RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 CROCCP3Q8IVE0 287 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 ZNF100Q8IYN0 542 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 ZNF808Q8N4W9 903 aaPredicted RBP11.09□□□□□ -0.63
VMP1-202ENST00000585847 CNEP1R1Q8N9A8 125 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 ZNF610Q8N9Z0 462 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 ST7LQ8TDW4 575 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 ZNRF4Q8WWF5 429 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 NANOS1Q8WY41 292 aaKnown RBP11.09□□□□□ -0.63
VMP1-202ENST00000585847 PELI1Q96FA3 418 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 BOD1Q96IK1 185 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 KCTD7Q96MP8 289 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 TBX5Q99593 518 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 ABHD6Q9BV23 337 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 OPN3Q9H1Y3 402 aaPredicted RBP11.09□□□□□ -0.63
VMP1-202ENST00000585847 C12orf49Q9H741 205 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 DDX28Q9NUL7 540 aaKnown RBP11.09□□□□□ -0.63
VMP1-202ENST00000585847 TMEM38BQ9NVV0 291 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 CCDC59Q9P031 241 aaKnown RBP11.09□□□□□ -0.63
VMP1-202ENST00000585847 PRSS50Q9UI38 385 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 IKZF2Q9UKS7 526 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 A8MXE2 369 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 IL1AP01583 271 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 RAF1P04049 648 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 UBCP0CG48 685 aaKnown RBP11.08□□□□□ -0.64
VMP1-202ENST00000585847 OR8G3PP0DMU2 310 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 CD8BP10966 210 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 GADD45AP24522 165 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 OPRM1P35372 400 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 SOX6P35712 828 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 OPRL1P41146 370 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 FOXG1P55316 489 aaPredicted RBP11.08□□□□□ -0.64
VMP1-202ENST00000585847 OR12D2P58182 307 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 PSMA6P60900 246 aaKnown RBP11.08□□□□□ -0.64
VMP1-202ENST00000585847 DGUOKQ16854 277 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 LIPNQ5VXI9 398 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 CARD17Q5XLA6 110 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 KLHL24Q6TFL4 600 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 B3GLCTQ6Y288 498 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 ZNF704Q6ZNC4 412 aaPredicted RBP11.08□□□□□ -0.64
VMP1-202ENST00000585847 YIPF7Q8N8F6 280 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 C1orf162Q8NEQ5 155 aaPredicted RBP11.08□□□□□ -0.64
VMP1-202ENST00000585847 THEM6Q8WUY1 208 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 ASB5Q8WWX0 329 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 NSMAFQ92636 917 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 DACH2Q96NX9 599 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 FOXB1Q99853 325 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 SEC61A2Q9H9S3 476 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 CRLF2Q9HC73 371 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 MRM2Q9UI43 246 aaKnown RBP11.08□□□□□ -0.64
VMP1-202ENST00000585847 ST6GALNAC2Q9UJ37 374 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 ZNF391Q9UJN7 358 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 COPS3Q9UNS2 423 aa11.08□□□□□ -0.64
VMP1-202ENST00000585847 TRBV2A0A0J9YWF9 115 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 NKX2-6A6NCS4 301 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 FAM90A27PA6NNH2 459 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 FAM171A2A8MVW0 826 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 ZNF879B4DU55 563 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 H2BFMP0C1H6 154 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 ZNF12P17014 697 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 MPGP29372 298 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 GDI2P50395 445 aaKnown RBP11.07□□□□□ -0.64
VMP1-202ENST00000585847 HIST1H3AP68431 136 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 DYNC1I2Q13409 638 aaKnown RBP11.07□□□□□ -0.64
VMP1-202ENST00000585847 MEP1BQ16820 701 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 SLC36A2Q495M3 483 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 HIST2H3PS2Q5TEC6 136 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 TSPO2Q5TGU0 170 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 FBXW9Q5XUX1 488 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 XKRXQ6PP77 449 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 HIST2H3AQ71DI3 136 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 DCXRQ7Z4W1 244 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 TPRA1Q86W33 373 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 AP3S1Q92572 193 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 SPTSSAQ969W0 71 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 MARVELD3Q96A59 401 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 SLAMF6Q96DU3 332 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 USB1Q9BQ65 265 aaKnown RBP11.07□□□□□ -0.64
VMP1-202ENST00000585847 RBM24Q9BX46 236 aaKnown RBP11.07□□□□□ -0.64
VMP1-202ENST00000585847 PIGMQ9H3S5 423 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 ISG20L2Q9H9L3 353 aaKnown RBP11.07□□□□□ -0.64
VMP1-202ENST00000585847 GPR35Q9HC97 309 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 SLC7A10Q9NS82 523 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 ACOXLQ9NUZ1 547 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 COQ3Q9NZJ6 369 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 ASH2LQ9UBL3 628 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 UPB1Q9UBR1 384 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 GDF2Q9UK05 429 aaPredicted RBP11.07□□□□□ -0.64
VMP1-202ENST00000585847 PROCRQ9UNN8 238 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 ZNF281Q9Y2X9 895 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 SF3B6Q9Y3B4 125 aaKnown RBP11.07□□□□□ -0.64
VMP1-202ENST00000585847 R4GMQ9 66 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 PRR14LQ5THK1 2151 aa11.07□□□□□ -0.64
VMP1-202ENST00000585847 ANKRD61A6NGH8 418 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 J3QW42 95 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 DVL2O14641 736 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 MSTNO14793 375 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 UPK3AO75631 287 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 SC5DO75845 299 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 CLDN14O95500 239 aa11.06□□□□□ -0.64
VMP1-202ENST00000585847 IGHV3-9P01782 118 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms