RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 OPRL1P41146 370 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ACTA2P62736 377 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ACTG2P63267 376 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 RAB35Q15286 201 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 GSG1Q2KHT4 349 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TP53I3Q53FA7 332 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PABPC1L2AQ5JQF8 200 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 OR2G6Q5TZ20 316 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ZNF774Q6NX45 483 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 LRRN1Q6UXK5 716 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SPATC1Q76KD6 591 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 VASH1Q7L8A9 365 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 KRT77Q7Z794 578 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 MDP1Q86V88 176 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SYS1Q8N2H4 156 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 CPEB3Q8NE35 698 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SPRYD4Q8WW59 207 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 GATAD2BQ8WXI9 593 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 LRRC46Q96FV0 321 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 MND1Q9BWT6 205 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 MROQ9BYG7 248 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ACTR6Q9GZN1 396 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 DDX28Q9NUL7 540 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PLEK2Q9NYT0 353 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 AMDHD2Q9Y303 409 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 LSM2Q9Y333 95 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SLC25A15Q9Y619 301 aa14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ANKRD17O75179 2603 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-228ENST00000583363 OR6C6A6NF89 314 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 MYL12BO14950 172 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ABHD16AO95870 558 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 KRT8P05787 483 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TACSTD2P09758 323 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 H2BFMP0C1H6 154 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 COX5BP10606 129 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ATP6V1B1P15313 513 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PAX7P23759 505 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 HOXC12P31275 282 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 CCKARP32238 428 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TFF3Q07654 80 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ECH1Q13011 328 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TBCEQ15813 527 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 RSPO1Q2MKA7 263 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 KCTD8Q6ZWB6 473 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ALDH16A1Q8IZ83 802 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 OR1F12Q8NHA8 337 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 HSD17B8Q92506 261 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 C4orf36Q96KX1 117 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 OR5M11Q96RB7 305 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 COQ7Q99807 217 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 MRPS26Q9BYN8 205 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 BABAM2Q9NXR7 383 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 IKZF2Q9UKS7 526 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 RTTNQ86VV8 2226 aa14.23□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ZNF878C9JN71 531 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 DOK2O60496 412 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 MT-ND5P03915 603 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SERPINA5P05154 406 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 WNT4P56705 351 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PLP2Q04941 152 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 DOC2BQ14184 412 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 RAB39AQ14964 217 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SPHARQ15513 63 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TAF13Q15543 124 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 TAB1Q15750 504 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 KRTAP27-1Q3LI81 207 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 UBE2UQ5VVX9 321 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 LIPNQ5VXI9 398 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 XAF1Q6GPH4 301 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 C22orf34Q6ZV56 151 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 FAM169BQ8N8A8 192 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 YIPF7Q8N8F6 280 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 RNF166Q96A37 237 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 MUCL1Q96DR8 90 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 KCNJ15Q99712 375 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ATF6BQ99941 703 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 HDHD2Q9H0R4 259 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 CRNNQ9UBG3 495 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 GNG8Q9UK08 70 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 LRP12Q9Y561 859 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 FBN2P35556 2912 aa14.22□□□□□ -0.13
CDK5RAP3-228ENST00000583363 IGKV3-15P01624 115 aa14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 LCKP06239 509 aa14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PPP3CBP16298 524 aa14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ZNF14P17017 642 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 JUNBP17275 347 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 DCTDP32321 178 aa14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 RIDAP52758 137 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 GRB2P62993 217 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PPA1Q15181 289 aa14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 SP5Q6BEB4 398 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ZNF584Q8IVC4 421 aa14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PELI1Q96FA3 418 aa14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 C1QTNF6Q9BXI9 259 aa14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 NIPAL2Q9H841 368 aa14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 ATPIF1Q9UII2 106 aa14.21□□□□□ -0.13
CDK5RAP3-228ENST00000583363 PDZD2O15018 2839 aa14.21□□□□□ -0.14
CDK5RAP3-228ENST00000583363 CSMD2Q7Z408 3487 aa14.21□□□□□ -0.14
CDK5RAP3-228ENST00000583363 PRR14LQ5THK1 2151 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms