RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 OR11H4Q8NGC9 324 aa14.51□□□□□ -0.09
RAB40B-206ENST00000571995 OR52N5Q8NH56 324 aa14.51□□□□□ -0.09
RAB40B-206ENST00000571995 CALHM2Q9HA72 323 aa14.51□□□□□ -0.09
RAB40B-206ENST00000571995 FOXJ3Q9UPW0 622 aa14.51□□□□□ -0.09
RAB40B-206ENST00000571995 ANGPTL7O43827 346 aa14.51□□□□□ -0.09
RAB40B-206ENST00000571995 CD79AP11912 226 aa14.51□□□□□ -0.09
RAB40B-206ENST00000571995 ZNF574Q6ZN55 896 aaPredicted RBP14.51□□□□□ -0.09
RAB40B-206ENST00000571995 D2HGDHQ8N465 521 aa14.51□□□□□ -0.09
RAB40B-206ENST00000571995 PRR18Q8N4B5 295 aa14.51□□□□□ -0.09
RAB40B-206ENST00000571995 RELL2Q8NC24 303 aaPredicted RBP14.51□□□□□ -0.09
RAB40B-206ENST00000571995 SOX7Q9BT81 388 aa14.51□□□□□ -0.09
RAB40B-206ENST00000571995 ZNF436Q9C0F3 470 aaPredicted RBP14.51□□□□□ -0.09
RAB40B-206ENST00000571995 NPAP1Q9NZP6 1156 aa14.51□□□□□ -0.09
RAB40B-206ENST00000571995 TRAV1-2A0A0B4J238 106 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 TEX13DA0A0J9YY54 714 aaPredicted RBP14.5□□□□□ -0.09
RAB40B-206ENST00000571995 PLPP3O14495 311 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 CXCL13O43927 109 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 RAB3AP20336 220 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 NPY4RP50391 375 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 CEBPGP53567 150 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 RPS11P62280 158 aaKnown RBP eCLIP14.5□□□□□ -0.09
RAB40B-206ENST00000571995 SFRP5Q5T4F7 317 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 C20orf196Q8IYI0 205 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 GPR137CQ8N3F9 429 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 FGF11Q92914 225 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 ADIPOR1Q96A54 375 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 SLC19A3Q9BZV2 496 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 DBHP09172 617 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 ASAH2BP0C7U1 165 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 AKAIN1P0CW23 69 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 ZNF93P35789 620 aaPredicted RBP14.5□□□□□ -0.09
RAB40B-206ENST00000571995 GABREP78334 506 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 WIPI1Q5MNZ9 446 aaPredicted RBP14.5□□□□□ -0.09
RAB40B-206ENST00000571995 POTEKPQ9BYX7 375 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 CA10Q9NS85 328 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 WNT16Q9UBV4 365 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 PCDHGA1Q9Y5H4 931 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 A0A1W2PP11 408 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 GGT3PA6NGU5 568 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 NPIPB9F8W1W9 429 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 RAB40ALP0C0E4 278 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 CCL2P13500 99 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 MMP15P51511 669 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 SSR4P51571 173 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 EFNA3P52797 238 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 DEFA5Q01523 94 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 GSG1Q2KHT4 349 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 FAM74A1Q5RGS3 127 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 GLIPR1L1Q6UWM5 242 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 DHRS13Q6UX07 377 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 NLRC3Q7RTR2 1065 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 OR52N4Q8NGI2 321 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 OR5D14Q8NGL3 314 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 RAB40AQ8WXH6 277 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 MVB12AQ96EY5 273 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 RASL10BQ96S79 203 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 ACTR6Q9GZN1 396 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 POFUT1Q9H488 388 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 MAB21L2Q9Y586 359 aa14.5□□□□□ -0.09
RAB40B-206ENST00000571995 BLACEA4D250 179 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 HLA-DQB1P01920 261 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 FCGR2AP12318 317 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 B4GALT1P15291 398 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 FAM198BQ6UWH4 519 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 FAM71CQ8NEG0 241 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 AKR7LQ8NHP1 331 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 CHRDQ9H2X0 955 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 HAO2Q9NYQ3 351 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 COPZ2Q9P299 210 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 FREM2Q5SZK8 3169 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 UPK3AO75631 287 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 HOXB5P09067 269 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 FAHP16930 419 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 NUP62P37198 522 aaPredicted RBP14.49□□□□□ -0.09
RAB40B-206ENST00000571995 PLA1AQ53H76 456 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 SPIN3Q5JUX0 258 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 NAA40Q86UY6 237 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 DUSP18Q8NEJ0 188 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 PIGCQ92535 297 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 C12orf49Q9H741 205 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 MRPL22Q9NWU5 206 aaKnown RBP14.49□□□□□ -0.09
RAB40B-206ENST00000571995 UBQLN2Q9UHD9 624 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 SPEF1Q9Y4P9 236 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 ABCA1O95477 2261 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 MN1Q10571 1320 aaPredicted RBP14.49□□□□□ -0.09
RAB40B-206ENST00000571995 LOC100289279A0A1B0GTE1 492 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 A6NIZ1 184 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 STMND1H3BQB6 276 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 ADAM10O14672 748 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 LDOC1O95751 146 aaPredicted RBP14.49□□□□□ -0.09
RAB40B-206ENST00000571995 CCL3P10147 92 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 ARPC4P59998 168 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 RAP1BP61224 184 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 RAP1AP62834 184 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 CSNK2A1P68400 391 aaPredicted RBP14.49□□□□□ -0.09
RAB40B-206ENST00000571995 CACNA1BQ00975 2339 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 TMEM244Q5VVB8 128 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 CSNK2A3Q8NEV1 391 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 MFFQ9GZY8 342 aa14.49□□□□□ -0.09
RAB40B-206ENST00000571995 PCDHGA5Q9Y5G8 931 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms