RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 SNAP29O95721 258 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 ABHD2P08910 425 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 PPIAL4GP0DN37 164 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 NR2F1P10589 423 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 NQO1P15559 274 aaKnown RBP4.68□□□□□ -1.66
CDH13-211ENST00000568770 ARRB2P32121 409 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 CCT5P48643 541 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 MMP15P51511 669 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 HOXC5Q00444 222 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 EMX2Q04743 252 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 PMS2P3Q13401 168 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 CASP8Q14790 479 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 MAPK11Q15759 364 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 FAM189A2Q15884 450 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 MOGQ16653 247 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 TBC1D28Q2M2D7 210 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 C4orf46Q504U0 113 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 LIN52Q52LA3 116 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 TMEM255AQ5JRV8 349 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 KPRPQ5T749 579 aaPredicted RBP4.68□□□□□ -1.66
CDH13-211ENST00000568770 PIWIL3Q7Z3Z3 882 aaKnown RBP4.68□□□□□ -1.66
CDH13-211ENST00000568770 SERPINA11Q86U17 422 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 SNX32Q86XE0 403 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 PEX5LQ8IYB4 626 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 CLIP4Q8N3C7 705 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 SPICQ8N5J4 248 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 OR10S1Q8NGN2 331 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 OR1J1Q8NGS3 322 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 OR6N1Q8NGY5 312 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 OR52P1PQ8NH57 321 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 LINC01006Q8NI28 216 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 UPRTQ96BW1 309 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 TUBGCP3Q96CW5 907 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 SLC30A2Q9BRI3 323 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 EGLN1Q9GZT9 426 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 PATZ1Q9HBE1 687 aaKnown RBP4.68□□□□□ -1.66
CDH13-211ENST00000568770 CDH20Q9HBT6 801 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 SLC6A13Q9NSD5 602 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 LIN7CQ9NUP9 197 aaKnown RBP4.68□□□□□ -1.66
CDH13-211ENST00000568770 OR5V1Q9UGF6 321 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 PRDM4Q9UKN5 801 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 NOTCH3Q9UM47 2321 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 LYSTQ99698 3801 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 ZSCAN5BA6NJL1 495 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 ZNF726A6NNF4 738 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 A8MXK9 166 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 F5H0A9 414 aaPredicted RBP4.67□□□□□ -1.66
CDH13-211ENST00000568770 COPEO14579 308 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 RIPK2O43353 540 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 ERLIN1O75477 346 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 SERPINI2O75830 405 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 MFN2O95140 757 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 TGDSO95455 350 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 CSF1P09603 554 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 CASQ1P31415 396 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 GRK5P34947 590 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 MPV17P39210 176 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 SOX2P48431 317 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 CSNK1A1P48729 337 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 BTG1P62324 171 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 PAX2Q02962 417 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 MAD2L1Q13257 205 aaPredicted RBP4.67□□□□□ -1.66
CDH13-211ENST00000568770 ZMYND11Q15326 602 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 C2orf68Q2NKX9 166 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 SMU1Q2TAY7 513 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 TMEM155Q4W5P6 130 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 ESCO2Q56NI9 601 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 VAX1Q5SQQ9 334 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 SPATA46Q5T0L3 261 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 THEM4Q5T1C6 240 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 FAM69AQ5T7M9 428 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 ANXA8L1Q5VT79 327 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 FAM205BPQ63HN1 556 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 WDR93Q6P2C0 686 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 TMEM53Q6P2H8 277 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 C6orf89Q6UWU4 347 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 BTNL3Q6UXE8 466 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 LRRN1Q6UXK5 716 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 NHLRC1Q6VVB1 395 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 WDR88Q6ZMY6 472 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 ZNF620Q6ZNG0 422 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 NET1Q7Z628 596 aaPredicted RBP4.67□□□□□ -1.66
CDH13-211ENST00000568770 LRRC28Q86X40 367 aaPredicted RBP4.67□□□□□ -1.66
CDH13-211ENST00000568770 LRRC34Q8IZ02 419 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 ZNF101Q8IZC7 436 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 ADPRHL1Q8NDY3 354 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 OR4K5Q8NGD3 323 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 OR1J2Q8NGS2 313 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 MRAPQ8TCY5 172 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 SLC38A4Q969I6 547 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 LRMDAQ9H2I8 198 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 C1orf198Q9H425 327 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 RNF121Q9H920 327 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 TCF7L2Q9NQB0 619 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 TMEM106BQ9NUM4 274 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 ARL8BQ9NVJ2 186 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 IL20RAQ9UHF4 553 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 PYCARDQ9ULZ3 195 aa4.67□□□□□ -1.66
CDH13-211ENST00000568770 ZNF443Q9Y2A4 671 aaPredicted RBP4.67□□□□□ -1.66
CDH13-211ENST00000568770 SIRT4Q9Y6E7 314 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms