RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 OR2A2Q6IF42 318 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 DPPA2Q7Z7J5 298 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 SFTPA1Q8IWL2 248 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 ZNF283Q8N7M2 679 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 UBAC2Q8NBM4 344 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 RCBTB1Q8NDN9 531 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 CCL4L1Q8NHW4 92 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 PATE1Q8WXA2 126 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 PAPOLGQ9BWT3 736 aaKnown RBP9.86□□□□□ -0.83
PALB2-206ENST00000568219 SLC17A9Q9BYT1 436 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 NELFAQ9H3P2 528 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 GAR1Q9NY12 217 aaKnown RBP9.86□□□□□ -0.83
PALB2-206ENST00000568219 RBM7Q9Y580 266 aaKnown RBP9.86□□□□□ -0.83
PALB2-206ENST00000568219 ENTPD2Q9Y5L3 495 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 MED12Q93074 2177 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 A0A0B4J2E0 115 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 A0A1B0GX12 115 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 SERINC4A6NH21 518 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 TSFMP43897 325 aaKnown RBP9.86□□□□□ -0.83
PALB2-206ENST00000568219 CST6Q15828 149 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 MIDNQ504T8 468 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 MOGAT1Q96PD6 335 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 C19orf43Q9BQ61 176 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 NRIP2Q9BQI9 281 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 NAA11Q9BSU3 229 aaPredicted RBP9.86□□□□□ -0.83
PALB2-206ENST00000568219 OR11A1Q9GZK7 315 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 DOCK6Q96HP0 2047 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 HIDE1A8MVS5 230 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 B4DGG1 531 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 MT-ND4LP03901 98 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 CSTBP04080 98 aaKnown RBP9.86□□□□□ -0.83
PALB2-206ENST00000568219 QDPRP09417 244 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 GABRR1P24046 479 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 MST1P26927 711 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 MECP2P51608 486 aaKnown RBP9.86□□□□□ -0.83
PALB2-206ENST00000568219 RAP1AP62834 184 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 MRGPREQ86SM8 312 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 C12orf40Q86WS4 652 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 SGPP2Q8IWX5 399 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 NPEPL1Q8NDH3 523 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 OR4D6Q8NGJ1 314 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 POM121Q96HA1 1249 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 COA3Q9Y2R0 106 aaPredicted RBP9.86□□□□□ -0.83
PALB2-206ENST00000568219 PCDHGA1Q9Y5H4 931 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 DOCK4Q8N1I0 1966 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 BPTFQ12830 3046 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 C2orf72A6NCS6 295 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 G3V3Q6 166 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 NDUFA2O43678 99 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 CT62P0C5K7 136 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 RPL12P30050 165 aaKnown RBP9.85□□□□□ -0.83
PALB2-206ENST00000568219 DHPSP49366 369 aaPredicted RBP9.85□□□□□ -0.83
PALB2-206ENST00000568219 SNU13P55769 128 aaKnown RBP9.85□□□□□ -0.83
PALB2-206ENST00000568219 TAS2R31P59538 309 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 MESP2Q0VG99 397 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 GNMTQ14749 295 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 TOMM20Q15388 145 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 MLF2Q15773 248 aaPredicted RBP9.85□□□□□ -0.83
PALB2-206ENST00000568219 OR2B11Q5JQS5 317 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 GPR157Q5UAW9 335 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 TMEM225Q6GV28 225 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 SULF2Q8IWU5 870 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 BMPERQ8N8U9 685 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 ZNF383Q8NA42 475 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 OR51F2Q8NH61 342 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 HPSE2Q8WWQ2 592 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 PIK3IP1Q96FE7 263 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 URM1Q9BTM9 101 aaKnown RBP9.85□□□□□ -0.83
PALB2-206ENST00000568219 LOC107986453A0A1B0GWG9 222 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 TBX19O60806 448 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 FABP4P15090 132 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 CTGFP29279 349 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 SLC35D3Q5M8T2 416 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 SLC36A1Q7Z2H8 476 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 TMEM217Q8N7C4 229 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 PHYHIPLQ96FC7 376 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 ZCCHC4Q9H5U6 513 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 TBC1D29Q9UFV1 150 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 SCAF4O95104 1147 aaKnown RBP9.85□□□□□ -0.83
PALB2-206ENST00000568219 IFNA10P01566 189 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 CD37P11049 281 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 CHATP28329 748 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 IGFALSP35858 605 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 IDH3GP51553 393 aaPredicted RBP9.85□□□□□ -0.83
PALB2-206ENST00000568219 RPS11P62280 158 aaKnown RBP eCLIP9.85□□□□□ -0.83
PALB2-206ENST00000568219 HIST2H3PS2Q5TEC6 136 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 TMEM182Q6ZP80 229 aaPredicted RBP9.85□□□□□ -0.83
PALB2-206ENST00000568219 MED25Q71SY5 747 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 MAMDC2Q7Z304 686 aaPredicted RBP9.85□□□□□ -0.83
PALB2-206ENST00000568219 DCXRQ7Z4W1 244 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 SKA3Q8IX90 412 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 IP6K3Q96PC2 410 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 SEC11CQ9BY50 192 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 SLCO5A1Q9H2Y9 848 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 VSIG4Q9Y279 399 aa9.85□□□□□ -0.83
PALB2-206ENST00000568219 MRPS2Q9Y399 296 aaKnown RBP9.85□□□□□ -0.83
PALB2-206ENST00000568219 TRAV14DV4A0A0A6YYC5 116 aa9.84□□□□□ -0.83
PALB2-206ENST00000568219 MBTPS2O43462 519 aa9.84□□□□□ -0.83
PALB2-206ENST00000568219 CRHP06850 196 aa9.84□□□□□ -0.83
PALB2-206ENST00000568219 SP6Q3SY56 376 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms