RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 H2BFWTQ7Z2G1 175 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.38□□□□□ -0.91
UBFD1-205ENST00000566136 LINC01555Q8NAE3 123 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 OR4C15Q8NGM1 316 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 FNDC8Q8TC99 324 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 ADAMTS17Q8TE56 1095 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 LZICQ8WZA0 190 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 RAB8BQ92930 207 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 TM4SF18Q96CE8 201 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 BOD1Q96IK1 185 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 PITX2Q99697 317 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 NPFFR1Q9GZQ6 430 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 TMEM38AQ9H6F2 299 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 LHX9Q9NQ69 397 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 MRTO4Q9UKD2 239 aaKnown RBP9.38□□□□□ -0.91
UBFD1-205ENST00000566136 TCF19Q9Y242 345 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 HSPE1-MOB4S4R3N1 261 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 A0A1W2PPE3 182 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 C17orf105B2RV13 164 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 TMPRSS11DO60235 418 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 PFDN1O60925 122 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 CYP7B1O75881 506 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 KRT75O95678 551 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 GPANK1O95872 356 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 BCHEP06276 602 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 TGFBR1P36897 503 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 RBBP4Q09028 425 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 C1orf61Q13536 156 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 CST6Q15828 149 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 DUSP7Q16829 419 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 ZNF630Q2M218 657 aaPredicted RBP9.38□□□□□ -0.91
UBFD1-205ENST00000566136 RNASE12Q5GAN4 147 aaKnown RBP9.38□□□□□ -0.91
UBFD1-205ENST00000566136 C17orf78Q8N4C9 275 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 TMEM156Q8N614 296 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 SMPDL3AQ92484 453 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 GABARAPL3Q9BY60 117 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 C5orf66Q9H5L9 145 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 Q9H8V8 135 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 TEX10Q9NXF1 929 aaPredicted RBP9.38□□□□□ -0.91
UBFD1-205ENST00000566136 C1RLQ9NZP8 487 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 ZFR2Q9UPR6 939 aaKnown RBP9.38□□□□□ -0.91
UBFD1-205ENST00000566136 ANGPT4Q9Y264 503 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 SNRNP200O75643 2136 aaKnown RBP9.37□□□□□ -0.91
UBFD1-205ENST00000566136 CKAP5Q14008 2032 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 OVOL3O00110 214 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 SFTPBP07988 381 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 VSIG8P0DPA2 414 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 ERGP11308 486 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 APOBEC1P41238 236 aaKnown RBP9.37□□□□□ -0.91
UBFD1-205ENST00000566136 DUSP3P51452 185 aaPredicted RBP9.37□□□□□ -0.91
UBFD1-205ENST00000566136 CXADRP78310 365 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 SPDYE7PQ495Y7 208 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 SIGIRRQ6IA17 410 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 TTLL10Q6ZVT0 673 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 LRTM2Q8N967 370 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 ABHD11Q8NFV4 315 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 OR1B1Q8NGR6 318 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 GEMIN6Q8WXD5 167 aaKnown RBP9.37□□□□□ -0.91
UBFD1-205ENST00000566136 BORCS5Q969J3 196 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 MTERF3Q96E29 417 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 HRASLS5Q96KN8 279 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 ALOXE3Q9BYJ1 711 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 PELI2Q9HAT8 420 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 RETNQ9HD89 108 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 FZD3Q9NPG1 666 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 ACOT13Q9NPJ3 140 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 ACOXLQ9NUZ1 547 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 NLGN3Q9NZ94 848 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 SDK1Q7Z5N4 2213 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 CACNA1AO00555 2505 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 LRRN3E7EW58 273 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 KMOO15229 486 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 DPM1O60762 260 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 SLC19A2O60779 497 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 AHSA1O95433 338 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 IFNW1P05000 195 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 OR4E1P0C645 316 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 C21orf33P30042 268 aaPredicted RBP9.37□□□□□ -0.91
UBFD1-205ENST00000566136 CALCRP30988 508 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 OPRL1P41146 370 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 NPBWR2P48146 333 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 SLC3A1Q07837 685 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 TATDN3Q17R31 274 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 MICAQ29983 383 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 OLIG3Q7RTU3 272 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 HMGN2P46Q86SG4 172 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 SEMA6DQ8NFY4 1073 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 OR5L2Q8NGL0 311 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 SNAPC3Q92966 411 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 RSPO3Q9BXY4 272 aaPredicted RBP9.37□□□□□ -0.91
UBFD1-205ENST00000566136 OR10A2Q9H208 303 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 ARMC7Q9H6L4 198 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 WDR54Q9H977 334 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 ACSL5Q9ULC5 683 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 WDR45Q9Y484 360 aa9.37□□□□□ -0.91
UBFD1-205ENST00000566136 IGKV1-8A0A0C4DH67 115 aa9.36□□□□□ -0.91
UBFD1-205ENST00000566136 LRRC3CA6NJW4 275 aa9.36□□□□□ -0.91
UBFD1-205ENST00000566136 C5orf58C9J3I9 102 aa9.36□□□□□ -0.91
UBFD1-205ENST00000566136 GABARAPO95166 117 aa9.36□□□□□ -0.91
UBFD1-205ENST00000566136 PLA2G1BP04054 148 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms