RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 DEFB113Q30KQ7 82 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 SLC35D3Q5M8T2 416 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 SYT6Q5T7P8 510 aaPredicted RBP12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 MUC15Q8N387 334 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 FGFBP3Q8TAT2 258 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 C11orf40Q8WZ69 217 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 MYDGFQ969H8 173 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 ISOC1Q96CN7 298 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 COG8Q96MW5 612 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 TSSK2Q96PF2 358 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 IL4I1Q96RQ9 567 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 DCLRE1CQ96SD1 692 aaKnown RBP12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 CDADC1Q9BWV3 514 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 HDHD2Q9H0R4 259 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 AMBNQ9NP70 447 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 CBLN4Q9NTU7 201 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 CNOT2Q9NZN8 540 aaKnown RBP12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 EFCAB10A6NFE3 127 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 E7EQL1 145 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 ENTPD6O75354 484 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 PIPP12273 146 aaPredicted RBP12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 ZNF823P16415 610 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 SPI1P17947 270 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 CALCRP30988 508 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 GDI2P50395 445 aaKnown RBP12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 FABP6P51161 128 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 TMBIM6P55061 237 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 ECH1Q13011 328 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 EFNB3Q15768 340 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 TEX30Q5JUR7 227 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 UBE2UQ5VVX9 321 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 GPR107Q5VW38 600 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 TCEANCQ8N8B7 351 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 OR2AJ1Q8NGZ0 328 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 C12orf43Q96C57 262 aaKnown RBP12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 TRMT61AQ96FX7 289 aaKnown RBP12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 MS4A3Q96HJ5 214 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 POM121L2Q96KW2 1035 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 Q96MT0 163 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 GSX2Q9BZM3 304 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 NAA50Q9GZZ1 169 aaKnown RBP12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 CXXC4Q9H2H0 198 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 PLEK2Q9NYT0 353 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 TVP23BQ9NYZ1 205 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 ASH2LQ9UBL3 628 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 EIF3KQ9UBQ5 218 aaKnown RBP12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 PLEKHA6Q9Y2H5 1048 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 DSCAMO60469 2012 aa12.1□□□□□ -0.47
PKNOX1-209ENST00000560448 NOTCH2Q04721 2471 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 OR6C6A6NF89 314 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 B9A039 149 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 DOK2O60496 412 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 FADS2O95864 444 aaKnown RBP12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 ADRA2AP08913 450 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 PATE4P0C8F1 98 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 C21orf33P30042 268 aaPredicted RBP12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 RGS6P49758 472 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 HIST1H3AP68431 136 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 ST3GAL4Q11206 333 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 SNTB2Q13425 540 aaKnown RBP12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 LSAMPQ13449 338 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 RAB35Q15286 201 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 TBCEQ15813 527 aaPredicted RBP12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 PCK2Q16822 640 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 HIST2H3PS2Q5TEC6 136 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 MEDAGQ5VYS4 303 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 HIST2H3AQ71DI3 136 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 RHOUQ7L0Q8 258 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 MYPOPQ86VE0 399 aaPredicted RBP12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 CYB561A3Q8NBI2 242 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 CPEB3Q8NE35 698 aaKnown RBP12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 RORBQ92753 470 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 YIPF6Q96EC8 236 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 COQ7Q99807 217 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 TRAF4Q9BUZ4 470 aaPredicted RBP12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 CDCA4Q9BXL8 241 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 WNT5BQ9H1J7 359 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 LIME1Q9H400 295 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 ELOVL3Q9HB03 270 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 EMC7Q9NPA0 242 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 ZNF701Q9NV72 531 aaPredicted RBP12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 DNAJC27Q9NZQ0 273 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 CYB5R1Q9UHQ9 305 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 LAMP3Q9UQV4 416 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 CMAHPQ9Y471 501 aa12.09□□□□□ -0.47
PKNOX1-209ENST00000560448 H3BMQ9 156 aa12.08□□□□□ -0.48
PKNOX1-209ENST00000560448 OVOL3O00110 214 aa12.08□□□□□ -0.48
PKNOX1-209ENST00000560448 SMPD2O60906 423 aa12.08□□□□□ -0.48
PKNOX1-209ENST00000560448 GLCEO94923 617 aa12.08□□□□□ -0.48
PKNOX1-209ENST00000560448 TFP02787 698 aa12.08□□□□□ -0.48
PKNOX1-209ENST00000560448 SERPINF1P36955 418 aa12.08□□□□□ -0.48
PKNOX1-209ENST00000560448 SELENOVP59797 346 aa12.08□□□□□ -0.48
PKNOX1-209ENST00000560448 ADAM8P78325 824 aa12.08□□□□□ -0.48
PKNOX1-209ENST00000560448 HGFACQ04756 655 aa12.08□□□□□ -0.48
PKNOX1-209ENST00000560448 SNAPC1Q16533 368 aa12.08□□□□□ -0.48
PKNOX1-209ENST00000560448 PRSS57Q6UWY2 283 aa12.08□□□□□ -0.48
PKNOX1-209ENST00000560448 B3GLCTQ6Y288 498 aa12.08□□□□□ -0.48
PKNOX1-209ENST00000560448 SLC16A12Q6ZSM3 486 aa12.08□□□□□ -0.48
PKNOX1-209ENST00000560448 VASH1Q7L8A9 365 aaPredicted RBP12.08□□□□□ -0.48
PKNOX1-209ENST00000560448 ERI1Q8IV48 349 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms