RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 NUDT8Q8WV74 236 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 LRP5LA4QPB2 252 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 BHLHE40O14503 412 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 IL9P15248 144 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 CLDN22Q8N7P3 220 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 SLC35G3Q8N808 338 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 RHOXF1Q8NHV9 184 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 FZD6O60353 706 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 TSPAN12O95859 305 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 PSMB1P20618 241 aaKnown RBP12.25□□□□□ -0.45
TRAF3-208ENST00000560371 OVCH1Q7RTY7 1134 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 OR2L13Q8N349 312 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 UBE2FQ969M7 185 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 FAM173AQ9BQD7 235 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 CLEC2DQ9UHP7 191 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 TEX51A0A1B0GUA7 166 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 PIPP12273 146 aaPredicted RBP12.24□□□□□ -0.45
TRAF3-208ENST00000560371 FABP6P51161 128 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 PMPCAQ10713 525 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 OR1C1Q15619 314 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 MED29Q9NX70 200 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 P4HTMQ9NXG6 502 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 DLEC1Q9Y238 1755 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 IMPA2O14732 288 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 DPPA2Q7Z7J5 298 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 CMC2Q9NRP2 79 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 MPDZO75970 2070 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 ETHE1O95571 254 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 CRYZL1O95825 349 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 CSF3P09919 207 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 ABCD3P28288 659 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 BAXQ07812 192 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 DTWD2Q8NBA8 298 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 OR4D9Q8NGE8 314 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 HPSE2Q8WWQ2 592 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 REEP6Q96HR9 211 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 OPALINQ96PE5 141 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 SAMD10Q9BYL1 202 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 HRH4Q9H3N8 390 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 PTTG3PQ9NZH4 202 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 COL5A3P25940 1745 aaPredicted RBP12.24□□□□□ -0.45
TRAF3-208ENST00000560371 IGHV1OR15-9A0A0B4J2B8 117 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 LINC01387J3KSC0 135 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 PPM1DO15297 605 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 PAPLNO95428 1278 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 TGM6O95932 706 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 PAX6P26367 422 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 LAP3P28838 519 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 GABRA4P48169 554 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 SPCS2Q15005 226 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 H2BFWTQ7Z2G1 175 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 TCTEX1D2Q8WW35 142 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 OR5M11Q96RB7 305 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 RPS10P5Q9NQ39 176 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 ASB1Q9Y576 335 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 CRYM-AS1A6NIL9 109 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 SCO1O75880 301 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 ZNF620Q6ZNG0 422 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 OR52N5Q8NH56 324 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 ROBO4Q8WZ75 1007 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 SEC22AQ96IW7 307 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 TXNIPQ9H3M7 391 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 GPR84Q9NQS5 396 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 TRDV1A0A1B0GX56 115 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 SERPINF1P36955 418 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 SUB1P53999 127 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRAF3-208ENST00000560371 FAM109BQ6ICB4 259 aaPredicted RBP12.24□□□□□ -0.45
TRAF3-208ENST00000560371 NT5CQ8TCD5 201 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 ZCCHC4Q9H5U6 513 aa12.24□□□□□ -0.45
TRAF3-208ENST00000560371 THADAQ6YHU6 1953 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 ACHEP22303 614 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 OR51E1Q8TCB6 317 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 ZNF419Q96HQ0 510 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-208ENST00000560371 TECTBQ96PL2 329 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 ANKRD36A6QL64 1941 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 MEIKINA0A087WXM9 373 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 PRSS37A4D1T9 235 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 FZD2Q14332 565 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 ZNF385BQ569K4 471 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 FAM212BQ9NTI7 297 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-208ENST00000560371 IGHV5-51A0A0C4DH38 117 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 RAF1P04049 648 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 OR8U8P0C7N1 319 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 TMEM92Q6UXU6 159 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 CMTM2Q8TAZ6 248 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 SLC25A21Q9BQT8 299 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-208ENST00000560371 CRISPLD2Q9H0B8 497 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 OPA3Q9H6K4 179 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 GNB1P62873 340 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 SLC39A9Q9NUM3 307 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 PLA2G3Q9NZ20 509 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 LOC107986453A0A1B0GWG9 222 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 SCAF4O95104 1147 aaKnown RBP12.23□□□□□ -0.45
TRAF3-208ENST00000560371 AADACP22760 399 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 SSPNQ14714 243 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 FAM199XQ6PEV8 388 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-208ENST00000560371 OR2V1Q8NHB1 315 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 FBXW5Q969U6 566 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 S1PR5Q9H228 398 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 SMOC1Q9H4F8 434 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms