RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 KCNG2Q9UJ96 466 aa11.85□□□□□ -0.51
TMED3-205ENST00000558562 IKZF2Q9UKS7 526 aa11.85□□□□□ -0.51
TMED3-205ENST00000558562 GSTK1Q9Y2Q3 226 aa11.85□□□□□ -0.51
TMED3-205ENST00000558562 CHD3Q12873 2000 aaKnown RBP11.84□□□□□ -0.51
TMED3-205ENST00000558562 IGKV1D-43A0A0B4J1Z2 117 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 METTL15A6NJ78 407 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 PSMD9O00233 223 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 ZNF593O00488 134 aaPredicted RBP11.84□□□□□ -0.51
TMED3-205ENST00000558562 GABRPO00591 440 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 OGG1O15527 345 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 SIAH2O43255 324 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 PLPP2O43688 288 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 CRLF1O75462 422 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 IL18BPO95998 194 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 TACSTD2P09758 323 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 OR8G3PP0DMU2 310 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 GAAP10253 952 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 PSKH1P11801 424 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 ZNF823P16415 610 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 ALOX5APP20292 161 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 PSMB10P40306 273 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 RPS27P42677 84 aaKnown RBP11.84□□□□□ -0.51
TMED3-205ENST00000558562 CSNK1A1P48729 337 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 SUCLG1P53597 346 aaKnown RBP11.84□□□□□ -0.51
TMED3-205ENST00000558562 FABP5Q01469 135 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 EGR3Q06889 387 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 SLC3A1Q07837 685 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 MRPL28Q13084 256 aaKnown RBP11.84□□□□□ -0.51
TMED3-205ENST00000558562 CDK5R1Q15078 307 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 MEP1BQ16820 701 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 ZNF684Q5T5D7 378 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 OTPQ5XKR4 325 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 DMKNQ6E0U4 476 aaPredicted RBP11.84□□□□□ -0.51
TMED3-205ENST00000558562 ABLIM2Q6H8Q1 611 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 SLC18B1Q6NT16 456 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 SLC25A47Q6Q0C1 308 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 CREB3L2Q70SY1 520 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 KCTD20Q7Z5Y7 419 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 EGFL6Q8IUX8 553 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 YIPF7Q8N8F6 280 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 ZNF454Q8N9F8 522 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 SLC26A10Q8NG04 563 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 OR10H5Q8NGA6 315 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 ASB17Q8WXJ9 295 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 NSMAFQ92636 917 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 CPNE4Q96A23 557 aaPredicted RBP11.84□□□□□ -0.51
TMED3-205ENST00000558562 WDYHV1Q96HA8 205 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 KCTD7Q96MP8 289 aa11.84□□□□□ -0.51
TMED3-205ENST00000558562 SF3B5Q9BWJ5 86 aaKnown RBP11.84□□□□□ -0.51
TMED3-205ENST00000558562 SLIRPQ9GZT3 109 aaKnown RBP11.84□□□□□ -0.51
TMED3-205ENST00000558562 DSCAMO60469 2012 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 A0A1W2PPL8 197 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 CNOT4O95628 575 aaKnown RBP11.83□□□□□ -0.52
TMED3-205ENST00000558562 ABHD16AO95870 558 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 CD8BP10966 210 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 GALP22466 123 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 FGF9P31371 208 aaPredicted RBP11.83□□□□□ -0.52
TMED3-205ENST00000558562 SOX6P35712 828 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 TGM4P49221 684 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 GDI2P50395 445 aaKnown RBP11.83□□□□□ -0.52
TMED3-205ENST00000558562 LHX2P50458 406 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 SIRPAP78324 504 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 ROR2Q01974 943 aaKnown RBP11.83□□□□□ -0.52
TMED3-205ENST00000558562 EIF2B1Q14232 305 aaKnown RBP11.83□□□□□ -0.52
TMED3-205ENST00000558562 SLC17A1Q14916 467 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 SF3B4Q15427 424 aaKnown RBP eCLIP11.83□□□□□ -0.52
TMED3-205ENST00000558562 CCDC58Q4VC31 144 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 RPL22L1Q6P5R6 122 aaKnown RBP11.83□□□□□ -0.52
TMED3-205ENST00000558562 GLB1L2Q8IW92 636 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 MEIOBQ8N635 442 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 MCFD2Q8NI22 146 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 HAVCR2Q8TDQ0 301 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 INTS12Q96CB8 462 aaKnown RBP11.83□□□□□ -0.52
TMED3-205ENST00000558562 SMIM19Q96E16 107 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 ZNF385AQ96PM9 386 aaKnown RBP11.83□□□□□ -0.52
TMED3-205ENST00000558562 CALHM2Q9HA72 323 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 KLHL9Q9P2J3 617 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 MRM2Q9UI43 246 aaKnown RBP11.83□□□□□ -0.52
TMED3-205ENST00000558562 ING1Q9UK53 422 aaPredicted RBP11.83□□□□□ -0.52
TMED3-205ENST00000558562 PMF1-BGLAPU3KQ54 211 aa11.83□□□□□ -0.52
TMED3-205ENST00000558562 DEFB108AA8MXU0 73 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 SULT1C4O75897 302 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 CDRT1O95170 752 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 MPZL1O95297 269 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 IL1AP01583 271 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 CD1AP06126 327 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 ZNF708P17019 499 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 LAP3P28838 519 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 CLDN15P56746 228 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 CLDN18P56856 261 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 DYNC1I2Q13409 638 aaKnown RBP11.82□□□□□ -0.52
TMED3-205ENST00000558562 ZNF404Q494X3 552 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 GCNT2Q8N0V5 402 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 OR6N1Q8NGY5 312 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 C11orf40Q8WZ69 217 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 ROBO4Q8WZ75 1007 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 ABTB1Q969K4 478 aaPredicted RBP11.82□□□□□ -0.52
TMED3-205ENST00000558562 TMEM54Q969K7 222 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 MCHR2Q969V1 340 aa11.82□□□□□ -0.52
TMED3-205ENST00000558562 PIK3IP1Q96FE7 263 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms