RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 NAAAQ02083 359 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 HHEXQ03014 270 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 MICBQ29980 383 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 C10orf91Q5T1B1 145 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 TMEM71Q6P5X7 295 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 ZNF704Q6ZNC4 412 aaPredicted RBP10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 PGAP1Q75T13 922 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 BAP18Q8IXM2 172 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 SLC30A7Q8NEW0 376 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 DCUN1D4Q92564 292 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 MRGPRFQ96AM1 343 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 CNTNAP3BQ96NU0 1288 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 OR52A1Q9UKL2 312 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 CSAG2Q9Y5P2 127 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 RAB27BO00194 218 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 EFSO43281 561 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 SNAPINO95295 136 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 NUDT14O95848 222 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 ACTL6AO96019 429 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 IFNA6P05013 189 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 ISG15P05161 165 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 CD79AP11912 226 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 CRABP1P29762 137 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 SLC37A1P57057 533 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 GLO1Q04760 184 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 AIMP2Q13155 320 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 TMEM244Q5VVB8 128 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 OR52W1Q6IF63 320 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 CBLN2Q8IUK8 224 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 METTL27Q8N6F8 245 aaPredicted RBP10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 PHOSPHO2Q8TCD6 241 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 BADQ92934 168 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 SLC46A1Q96NT5 459 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 CDC6Q99741 560 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 BIN3Q9NQY0 253 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 TMEM100Q9NV29 134 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 C13orf42A0A1B0GVH6 325 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 ICOSLGO75144 302 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 SRSF10O75494 262 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 GP1BBP13224 206 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 MYOGP15173 224 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 HRH1P35367 487 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 RFC3P40938 356 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 TAS2R31P59538 309 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 CYCSP99999 105 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 OR7A5Q15622 319 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 TOMM34Q15785 309 aaPredicted RBP10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 PNLIPRP3Q17RR3 467 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 H3F3CQ6NXT2 135 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 LYPD6Q86Y78 171 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 GVQW1Q8N7I0 195 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 ZNF321PQ8N8H1 164 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 ADAD2Q8NCV1 583 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 C12orf57Q99622 126 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 ADAT1Q9BUB4 502 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 G6PC2Q9NQR9 355 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 PNO1Q9NRX1 252 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 F5P12259 2224 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 TRBV6-7A0A0A0MS04 114 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 WIPF3A6NGB9 483 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 FRG2CA6NGY1 282 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 SCGNO76038 276 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 CELA2BP08218 269 aaPredicted RBP10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 PGCP20142 388 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 TBPP20226 339 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 SERPINF1P36955 418 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 CBX5P45973 191 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 CX3CR1P49238 355 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 DCDP81605 110 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 SQSTM1Q13501 440 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 NKAPLQ5M9Q1 402 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 COL13A1Q5TAT6 717 aaPredicted RBP10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 PARM1Q6UWI2 310 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 MARCH3Q86UD3 253 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 PRR22Q8IZ63 422 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 DTWD2Q8NBA8 298 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 OR13H1Q8NG92 308 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 PTPMT1Q8WUK0 201 aaPredicted RBP10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 NUDCD2Q8WVJ2 157 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 CMBLQ96DG6 245 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 NMES1Q9C002 83 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 ZNF768Q9H5H4 540 aaKnown RBP10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 IFT22Q9H7X7 185 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 TREM1Q9NP99 234 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 MMP26Q9NRE1 261 aa10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 COA3Q9Y2R0 106 aaPredicted RBP10.58□□□□□ -0.72
VIPAS39-211ENST00000557658 ARID1BQ8NFD5 2236 aaPredicted RBP10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 OR6C76A6NM76 312 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 DBX1A6NMT0 343 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 DXOO77932 396 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 ATXN8OSP0DMR3 200 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 ZNF823P16415 610 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 PLEKHN1Q494U1 663 aaPredicted RBP10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 ZNF542PQ5EBM4 170 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 TMEM31Q5JXX7 168 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 OR1M1Q8NGA1 313 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 FGF14Q92915 247 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 RPP25Q9BUL9 199 aaKnown RBP10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 RTN4RQ9BZR6 473 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 SELENOIQ9C0D9 397 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms