RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 CEBPBP17676 345 aa14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 OR52W1Q6IF63 320 aa14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 OR10D4PQ8NGN7 298 aa14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 EDAQ92838 391 aa14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 CCNL2Q96S94 520 aaPredicted RBP14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 ZNF2Q9BSG1 426 aaPredicted RBP14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 TINAGL1Q9GZM7 467 aaPredicted RBP14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 ARGFXA6NJG6 315 aa14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 SLC17A2O00624 439 aa14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 HLA-DOBP13765 273 aa14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 GNB3P16520 340 aa14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 MSX1P28360 303 aa14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 BAXQ07812 192 aa14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 OR6S1Q8NH40 331 aa14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 ZFPM2Q8WW38 1151 aa14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 ZNF251Q9BRH9 671 aa14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 MED9Q9NWA0 146 aa14.39□□□□□ -0.11
RBFOX1-212ENST00000550418 RNF212BA8MTL3 300 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 HMGA1P17096 107 aaKnown RBP14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 B3GNTL1Q67FW5 361 aaPredicted RBP14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 FAM185AQ8N0U4 392 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 FOXJ3Q9UPW0 622 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 BRWD1Q9NSI6 2320 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 OR6C68A6NDL8 312 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 K7ESM1 405 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 ERVH48-1M5A8F1 160 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 GPR31O00270 319 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 MARCH3Q86UD3 253 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 LRRC18Q8N456 261 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 COMMD1Q8N668 190 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 OR11H7Q8NGC8 314 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 RXFP4Q8TDU9 374 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 MITD1Q8WV92 249 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 WWTR1Q9GZV5 400 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 LYRM4Q9HD34 91 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 ELF5Q9UKW6 265 aaPredicted RBP14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 CALCRP30988 508 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 RNF151Q2KHN1 245 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 C1orf140Q5VVS0 124 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 CD300LDQ6UXZ3 194 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 CCL26Q9Y258 94 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 IL2RGP31785 369 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 EEF1A1P68104 462 aaKnown RBP14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 IRF3Q14653 427 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 TMEM128Q5BJH2 165 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 ZNF684Q5T5D7 378 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 FAM199XQ6PEV8 388 aaPredicted RBP14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 ARIH2OSQ8N7S6 290 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 ZNF610Q8N9Z0 462 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 CNRIP1Q96F85 164 aaPredicted RBP14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 MS4A7Q9GZW8 240 aaPredicted RBP14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 OR14J1Q9UGF5 321 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 FLVCR1Q9Y5Y0 555 aa14.38□□□□□ -0.11
RBFOX1-212ENST00000550418 PCBD1P61457 104 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 GUK1Q16774 197 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 TMEM176BQ3YBM2 270 aaPredicted RBP14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 STPG2Q8N412 459 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 PELI1Q96FA3 418 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 NKX3-1Q99801 234 aaPredicted RBP14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 NXF2Q9GZY0 626 aaKnown RBP14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 CATR1Q13166 79 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 DHRS2Q13268 280 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 MANEAQ5SRI9 462 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 PLPP6Q8IY26 295 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 ZFP62Q8NB50 900 aaPredicted RBP14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 UBAC2Q8NBM4 344 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 SIGLEC11Q96RL6 698 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 C8orf33Q9H7E9 229 aaPredicted RBP14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 OSGIN2Q9Y236 505 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 MED16Q9Y2X0 877 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 PIAS3Q9Y6X2 628 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 LOXHD1Q8IVV2 1947 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 RP1L1Q8IWN7 2480 aaPredicted RBP14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 VSTM5A8MXK1 200 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 CD79AP11912 226 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 RPA2P15927 270 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 IKZF1Q13422 519 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 SLC17A1Q14916 467 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 ZNF362Q5T0B9 420 aaPredicted RBP14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 LCN15Q6UWW0 184 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 DBX2Q6ZNG2 339 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 ZNF346Q9UL40 294 aaKnown RBP14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 EXOGQ9Y2C4 368 aaKnown RBP14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 TRBV5-3A0A0A0MS03 114 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 TMEM218A2RU14 115 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 NXPH3O95157 252 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 SNCAP37840 140 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 HTR5AP47898 357 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 ZNF485Q8NCK3 441 aa14.37□□□□□ -0.11
RBFOX1-212ENST00000550418 ACTL6BO94805 426 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 CD22P20273 847 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 TUSC1Q2TAM9 212 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 FAM58AQ8N1B3 248 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 MRPL22Q9NWU5 206 aaKnown RBP14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 POM121BA6NF01 834 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 PRAMEF26H0Y7S4 382 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 SMIM6P0DI80 62 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 FGF7P21781 194 aa14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 HOXA1P49639 335 aaPredicted RBP14.36□□□□□ -0.11
RBFOX1-212ENST00000550418 UBE2NP61088 152 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms