RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 SEPSECSQ9HD40 501 aaKnown RBP5.68□□□□□ -1.5
TMEM116-208ENST00000549537 DYNLRB1Q9NP97 96 aa5.68□□□□□ -1.5
TMEM116-208ENST00000549537 NDUFAF4Q9P032 175 aa5.68□□□□□ -1.5
TMEM116-208ENST00000549537 STX18Q9P2W9 335 aaKnown RBP5.68□□□□□ -1.5
TMEM116-208ENST00000549537 ZNF346Q9UL40 294 aaKnown RBP5.68□□□□□ -1.5
TMEM116-208ENST00000549537 FZR1Q9UM11 496 aa5.68□□□□□ -1.5
TMEM116-208ENST00000549537 ENPP4Q9Y6X5 453 aa5.68□□□□□ -1.5
TMEM116-208ENST00000549537 LOC100509620A0A075B734 347 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 SLC22A23A1A5C7 686 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 A6NIZ1 184 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 EFCAB9A8MZ26 197 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 LYNX1G3V0Z9 82 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 NDUFAB1O14561 156 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 SLC16A6O15403 523 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 RP2O75695 350 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 TSPAN9O75954 239 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 CLPTM1O96005 669 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 PTHP01270 115 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 ANXA2P07355 339 aaKnown RBP5.67□□□□□ -1.5
TMEM116-208ENST00000549537 FAM157CP0CG43 387 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 LYNX1P0DP58 116 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 SAGP10523 405 aaPredicted RBP5.67□□□□□ -1.5
TMEM116-208ENST00000549537 APEHP13798 732 aaKnown RBP5.67□□□□□ -1.5
TMEM116-208ENST00000549537 ZNF32P17041 273 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 STOMP27105 288 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 APEX1P27695 318 aaKnown RBP5.67□□□□□ -1.5
TMEM116-208ENST00000549537 WNT5AP41221 380 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 OMPP47874 163 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 UCP2P55851 309 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 FXYD6P3P58550 94 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 CTXN1P60606 82 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 RAP1BP61224 184 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 ERVS71-1P61550 626 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 RAP1AP62834 184 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 MRPS11P82912 194 aaKnown RBP5.67□□□□□ -1.5
TMEM116-208ENST00000549537 PSG4Q00888 419 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 GALK2Q01415 458 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 CD47Q08722 323 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 TMED1Q13445 227 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 TOP3AQ13472 1001 aaPredicted RBP5.67□□□□□ -1.5
TMEM116-208ENST00000549537 DGCR6Q14129 220 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 ENDOGQ14249 297 aaKnown RBP5.67□□□□□ -1.5
TMEM116-208ENST00000549537 SEC23BQ15437 767 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 TRIP10Q15642 601 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 CARTPTQ16568 116 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 CHRFAM7AQ494W8 412 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 ZBED5Q49AG3 693 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 PABPC1L2AQ5JQF8 200 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 THEM4Q5T1C6 240 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 GKAP1Q5VSY0 366 aaPredicted RBP5.67□□□□□ -1.5
TMEM116-208ENST00000549537 RGS7BPQ6MZT1 257 aaPredicted RBP5.67□□□□□ -1.5
TMEM116-208ENST00000549537 WDR73Q6P4I2 378 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 PODNL1Q6PEZ8 512 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 ZER1Q7Z7L7 766 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 OAFQ86UD1 273 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 LYSMD2Q8IV50 215 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 LRRC18Q8N456 261 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 ARIH2OSQ8N7S6 290 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 FNDC8Q8TC99 324 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 NSMAFQ92636 917 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 PTP4A1Q93096 173 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 YIPF5Q969M3 257 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 POM121L2Q96KW2 1035 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 SNX22Q96L94 193 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 GPX7Q96SL4 187 aaPredicted RBP5.67□□□□□ -1.5
TMEM116-208ENST00000549537 RACGAP1Q9H0H5 632 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 WNT5BQ9H1J7 359 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 GORASP2Q9H8Y8 452 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 RNF121Q9H920 327 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 SPAG4Q9NPE6 437 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 DCAF13Q9NV06 445 aaKnown RBP5.67□□□□□ -1.5
TMEM116-208ENST00000549537 CD300AQ9UGN4 299 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 CDC42EP3Q9UKI2 254 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 ADAM18Q9Y3Q7 739 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 TGP01266 2768 aa5.67□□□□□ -1.5
TMEM116-208ENST00000549537 TRBV4-1A0A0J9YWV2 114 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 IQCMA0A1B0GVH7 501 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 PRSS37A4D1T9 235 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 LRP5LA4QPB2 252 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 GMNCA6NCL1 334 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 C17orf100A8MU93 164 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 H7C1C5 153 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 LMX1BO60663 402 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 IGHV3-13P01766 116 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 MT-ND5P03915 603 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 TK1P04183 234 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 H1F0P07305 194 aaKnown RBP5.66□□□□□ -1.5
TMEM116-208ENST00000549537 ERCC1P07992 297 aaPredicted RBP5.66□□□□□ -1.5
TMEM116-208ENST00000549537 CD14P08571 375 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 SNRNP70P08621 437 aaKnown RBP5.66□□□□□ -1.5
TMEM116-208ENST00000549537 CST2P09228 141 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 NR2C1P13056 603 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 HSD17B1P14061 328 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 RPS2P15880 293 aaKnown RBP5.66□□□□□ -1.5
TMEM116-208ENST00000549537 TCN1P20061 433 aaPredicted RBP5.66□□□□□ -1.5
TMEM116-208ENST00000549537 ACHEP22303 614 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 COL8A2P25067 703 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 LAP3P28838 519 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 IFNA8P32881 189 aa5.66□□□□□ -1.5
TMEM116-208ENST00000549537 ARL3P36405 182 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms