RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TMPPEQ6ZT21 453 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 OR4D6Q8NGJ1 314 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 METTL21AQ8WXB1 218 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 TCEAL3Q969E4 200 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 FAM46BQ96A09 425 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 CMBLQ96DG6 245 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 ZNF251Q9BRH9 671 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 TWSG1Q9GZX9 223 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 OR10A5Q9H207 317 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 RNF122Q9H9V4 155 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 OR2S2Q9NQN1 319 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 SMCO4Q9NRQ5 59 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 DHCR7Q9UBM7 475 aaKnown RBP12.74□□□□□ -0.37
SRP54-202ENST00000546080 RAB22AQ9UL26 194 aa12.74□□□□□ -0.37
SRP54-202ENST00000546080 A0A0J9YY10 115 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 C1orf196B1AJZ1 125 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 SCDO00767 359 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 SLC16A7O60669 478 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 PLGP00747 810 aaPredicted RBP12.73□□□□□ -0.37
SRP54-202ENST00000546080 S100A6P06703 90 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 PTAFRP25105 342 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 GPR3P46089 330 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 C1orf100Q5SVJ3 147 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 MDGA2Q7Z553 956 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 NKAIN3Q8N8D7 197 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 SAT2Q96F10 170 aaPredicted RBP12.73□□□□□ -0.37
SRP54-202ENST00000546080 MRPL22Q9NWU5 206 aaKnown RBP12.73□□□□□ -0.37
SRP54-202ENST00000546080 LOC107986453A0A1B0GWG9 222 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 LOC390937A0A1W2PQ73 354 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 WIPF3A6NGB9 483 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 MSGN1A6NI15 193 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 RNASEK-C17orf49H0YIS7 233 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 H0YIZ8 118 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 RAB27BO00194 218 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 PRKNO60260 465 aaPredicted RBP12.73□□□□□ -0.37
SRP54-202ENST00000546080 ABCD3P28288 659 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 SLC6A9P48067 706 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 RBM39Q14498 530 aaKnown RBP12.73□□□□□ -0.37
SRP54-202ENST00000546080 SGCAQ16586 387 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 DEFB110Q30KQ9 67 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 FNDC7Q5VTL7 733 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 MED25Q71SY5 747 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 C15orf54Q8N8G6 183 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 MARCH1Q8TCQ1 289 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 ADAMTS17Q8TE56 1095 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 C8orf44Q96CB5 159 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 ABHD6Q9BV23 337 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 SEC61A2Q9H9S3 476 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 UBQLN4Q9NRR5 601 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 WIF1Q9Y5W5 379 aa12.73□□□□□ -0.37
SRP54-202ENST00000546080 PTPRSQ13332 1948 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 TRAV20A0A0B4J274 112 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 PRSS37A4D1T9 235 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 ZNF264O43296 627 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 MBTPS2O43462 519 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 PMP2P02689 132 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 CBR1P16152 277 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 SQSTM1Q13501 440 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 AKIRIN2Q53H80 203 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 POMZP3Q6PJE2 187 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 RBMS3Q6XE24 437 aaKnown RBP12.72□□□□□ -0.37
SRP54-202ENST00000546080 C12orf76Q8N812 135 aaPredicted RBP12.72□□□□□ -0.37
SRP54-202ENST00000546080 ROBO4Q8WZ75 1007 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 C14orf79Q96F83 325 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 SMIM8Q96KF7 97 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 S1PR5Q9H228 398 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 FN3KRPQ9HA64 309 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 PRTFDC1Q9NRG1 225 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 GSN-AS1Q9NRJ2 163 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 EMC9Q9Y3B6 208 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 MPDZO75970 2070 aa12.72□□□□□ -0.37
SRP54-202ENST00000546080 A0A0A6YYC8 382 aaPredicted RBP12.71□□□□□ -0.37
SRP54-202ENST00000546080 A6NCN8 305 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 H0Y8X5 98 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 I3L1I5 382 aaPredicted RBP12.71□□□□□ -0.37
SRP54-202ENST00000546080 HCRTR1O43613 425 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 GMFGO60234 142 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 ICOSLGO75144 302 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 TIMP1P01033 207 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 RNH1P13489 461 aaKnown RBP12.71□□□□□ -0.37
SRP54-202ENST00000546080 RUNX3Q13761 415 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 ERV3-1Q14264 604 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 NFATC4Q14934 902 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 ELAVL1Q15717 326 aaKnown RBP12.71□□□□□ -0.37
SRP54-202ENST00000546080 PRSS54Q6PEW0 395 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 ZNF761Q86XN6 746 aaPredicted RBP12.71□□□□□ -0.37
SRP54-202ENST00000546080 OR52N5Q8NH56 324 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 SPPL3Q8TCT6 385 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 TRIM43Q96BQ3 446 aaPredicted RBP12.71□□□□□ -0.37
SRP54-202ENST00000546080 WDR92Q96MX6 357 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 HRASLS2Q9NWW9 162 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 R4GMQ9 66 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 C5orf52A6NGY3 159 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 UBE2CO00762 179 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 MED6O75586 246 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 APODP05090 189 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 CTSBP07858 339 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 GNB3P16520 340 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 TBPP20226 339 aa12.71□□□□□ -0.37
SRP54-202ENST00000546080 PAX6P26367 422 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms