RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 GASTP01350 101 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 ADH4P08319 380 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 PPP1R8Q12972 351 aaKnown RBP12.69□□□□□ -0.38
RAB40B-202ENST00000538809 ZMAT1Q5H9K5 638 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 OR2T5Q6IEZ7 315 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 PGM2L1Q6PCE3 622 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 DNM1P34Q6PK57 102 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 CORO6Q6QEF8 472 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 TRPM8Q7Z2W7 1104 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 SDR9C7Q8NEX9 313 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 SLC26A10Q8NG04 563 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 OR8D4Q8NGM9 314 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 OR2T29Q8NH02 315 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 OR51F2Q8NH61 342 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 OR1F12Q8NHA8 337 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 CCL17Q92583 94 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 POP5Q969H6 163 aaKnown RBP12.69□□□□□ -0.38
RAB40B-202ENST00000538809 PLA2G12AQ9BZM1 189 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 EGLN1Q9GZT9 426 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 SRA1Q9HD15 236 aaKnown RBP12.69□□□□□ -0.38
RAB40B-202ENST00000538809 RPRD1BQ9NQG5 326 aaKnown RBP12.69□□□□□ -0.38
RAB40B-202ENST00000538809 CYSLTR2Q9NS75 346 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 TBCCD1Q9NVR7 557 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 DCAF16Q9NXF7 216 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 IL20Q9NYY1 176 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 CGGBP1Q9UFW8 167 aaPredicted RBP12.69□□□□□ -0.38
RAB40B-202ENST00000538809 KLHL21Q9UJP4 597 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 PURGQ9UJV8 347 aaKnown RBP12.69□□□□□ -0.38
RAB40B-202ENST00000538809 LHFPL6Q9Y693 200 aa12.69□□□□□ -0.38
RAB40B-202ENST00000538809 ISPDA4D126 451 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 UBOX5O94941 541 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 CCNB2O95067 398 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 RENP00797 406 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 PCMT1P22061 227 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 THBS2P35442 1172 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 TNFAIP6P98066 277 aaPredicted RBP12.68□□□□□ -0.38
RAB40B-202ENST00000538809 COX10Q12887 443 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 TRAP1Q12931 704 aaKnown RBP12.68□□□□□ -0.38
RAB40B-202ENST00000538809 FAM98BQ52LJ0 330 aaKnown RBP12.68□□□□□ -0.38
RAB40B-202ENST00000538809 ZNF362Q5T0B9 420 aaPredicted RBP12.68□□□□□ -0.38
RAB40B-202ENST00000538809 RPL13AP3Q6NVV1 102 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 Q6ZR03 302 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 RASSF6Q6ZTQ3 369 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 LINC00346Q8IVM7 164 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 ADGRG5Q8IZF4 528 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 BCAS4Q8TDM0 211 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 CCDC124Q96CT7 223 aaKnown RBP12.68□□□□□ -0.38
RAB40B-202ENST00000538809 SLC7A6OSQ96CW6 309 aaPredicted RBP12.68□□□□□ -0.38
RAB40B-202ENST00000538809 RAB39BQ96DA2 213 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 CMBLQ96DG6 245 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 TIMD4Q96H15 378 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 DGCR6LQ9BY27 220 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 PTTG3PQ9NZH4 202 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 ZDHHC8Q9ULC8 765 aa12.68□□□□□ -0.38
RAB40B-202ENST00000538809 DEAF1O75398 565 aaPredicted RBP12.67□□□□□ -0.38
RAB40B-202ENST00000538809 IGHV2-5P01817 119 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 CD55P08174 381 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 RAP2AP10114 183 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 NOS3P29474 1203 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 LIPAP38571 399 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.67□□□□□ -0.38
RAB40B-202ENST00000538809 CDK5R2Q13319 367 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 HLXQ14774 488 aaPredicted RBP12.67□□□□□ -0.38
RAB40B-202ENST00000538809 MICAQ29983 383 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 KRTAP27-1Q3LI81 207 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 CLEC12AQ5QGZ9 265 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 SLC35F1Q5T1Q4 408 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 OR5AS1Q8N127 324 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 OR2Z1Q8NG97 314 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 RAB1CQ92928 201 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 GAL3ST1Q99999 423 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 THTPAQ9BU02 230 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 METTL17Q9H7H0 456 aaPredicted RBP12.67□□□□□ -0.38
RAB40B-202ENST00000538809 UBAP1Q9NZ09 502 aa12.67□□□□□ -0.38
RAB40B-202ENST00000538809 TRAV20A0A0B4J274 112 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 AQP12BA6NM10 295 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 J3QW42 95 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 KITLGP21583 273 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 TUBG1P23258 451 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 GK3PQ14409 553 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 RSPO1Q2MKA7 263 aaPredicted RBP12.66□□□□□ -0.38
RAB40B-202ENST00000538809 ACSM5Q6NUN0 579 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 SHQ1Q6PI26 577 aaKnown RBP12.66□□□□□ -0.38
RAB40B-202ENST00000538809 CFAP77Q6ZQR2 320 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 AQP12AQ8IXF9 295 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 LNX2Q8N448 690 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 AQP11Q8NBQ7 271 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 GJC3Q8NFK1 279 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 OR52L1Q8NGH7 329 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 OR52E2Q8NGJ4 325 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 ITLN1Q8WWA0 313 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 DCLRE1CQ96SD1 692 aaKnown RBP12.66□□□□□ -0.38
RAB40B-202ENST00000538809 DIRC2Q96SL1 478 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 COQ7Q99807 217 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 C19orf24Q9BVV8 132 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 HDHD2Q9H0R4 259 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 REEP1Q9H902 201 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 TUBG2Q9NRH3 451 aa12.66□□□□□ -0.38
RAB40B-202ENST00000538809 MRPL22Q9NWU5 206 aaKnown RBP12.66□□□□□ -0.38
RAB40B-202ENST00000538809 SAMHD1Q9Y3Z3 626 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms