RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 NDUFA2O43678 99 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 SLC2A10O95528 541 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 SNRPAP09012 282 aaKnown RBP7.47□□□□□ -1.21
CPSF7-217ENST00000537162 IGHV4-30-4P0DP06 118 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 HPCAP84074 193 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 SLC7A5Q01650 507 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 PTGR1Q14914 329 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 MAPK11Q15759 364 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 UAP1Q16222 522 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-217ENST00000537162 SGCAQ16586 387 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 RABL3Q5HYI8 236 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 LDLRAD2Q5SZI1 272 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 ZNF826PQ6ZT77 177 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 ZNF572Q7Z3I7 529 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-217ENST00000537162 NET1Q7Z628 596 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-217ENST00000537162 NUDCD3Q8IVD9 361 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 OR5M8Q8NGP6 311 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 PTP4A1Q93096 173 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 SLC25A44Q96H78 314 aaPredicted RBP7.47□□□□□ -1.21
CPSF7-217ENST00000537162 METTL2AQ96IZ6 378 aaKnown RBP7.47□□□□□ -1.21
CPSF7-217ENST00000537162 TUBB1Q9H4B7 451 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 METTL8Q9H825 291 aaKnown RBP7.47□□□□□ -1.21
CPSF7-217ENST00000537162 SIAEQ9HAT2 523 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 LZTFL1Q9NQ48 299 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 C19orf73Q9NVV2 129 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 MRPL39Q9NYK5 338 aaKnown RBP7.47□□□□□ -1.21
CPSF7-217ENST00000537162 PTTG3PQ9NZH4 202 aa7.47□□□□□ -1.21
CPSF7-217ENST00000537162 PRPF19Q9UMS4 504 aaKnown RBP7.47□□□□□ -1.21
CPSF7-217ENST00000537162 EXOC1LA0A1B0GW35 172 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 LSM1O15116 133 aaKnown RBP7.46□□□□□ -1.22
CPSF7-217ENST00000537162 TFF1P04155 84 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 DBIP07108 87 aaKnown RBP7.46□□□□□ -1.22
CPSF7-217ENST00000537162 RAC2P15153 192 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 SPNP16150 400 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 AMY2BP19961 511 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 FPR3P25089 353 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 MTNR1BP49286 362 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 ZNF84P51523 738 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 MRPS34P82930 218 aaKnown RBP7.46□□□□□ -1.22
CPSF7-217ENST00000537162 IKZF1Q13422 519 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 RBMY1FQ15415 496 aaKnown RBP7.46□□□□□ -1.22
CPSF7-217ENST00000537162 HAGHQ16775 308 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 GALNTL6Q49A17 601 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 PDCD4Q53EL6 469 aaKnown RBP7.46□□□□□ -1.22
CPSF7-217ENST00000537162 C1orf94Q6P1W5 598 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 RANBP3LQ86VV4 465 aaPredicted RBP7.46□□□□□ -1.22
CPSF7-217ENST00000537162 GCSAMQ8N6F7 178 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 CLDN22Q8N7P3 220 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 H1FXQ92522 213 aaKnown RBP7.46□□□□□ -1.22
CPSF7-217ENST00000537162 SLC7A6Q92536 515 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 SEH1LQ96EE3 360 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 RNFT2Q96EX2 444 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 KCNN2Q9H2S1 579 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 ATAD3AQ9NVI7 634 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 PGPEP1Q9NXJ5 209 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 SNX24Q9Y343 169 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 LYVE1Q9Y5Y7 322 aa7.46□□□□□ -1.22
CPSF7-217ENST00000537162 IGLV1-36A0A0B4J1U3 117 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 G3V2L1 256 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 M0R1W7 72 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 AGR2O95994 175 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 IFNA6P05013 189 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 LINC00032P0C843 101 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 ADORA3P0DMS8 318 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 CD200P41217 278 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 ZNF75DP51815 510 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 PRR20EP86478 221 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 PRR20CP86479 221 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 PRR20DP86480 221 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 PRR20BP86481 221 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 PRR20AP86496 221 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 FMODQ06828 376 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 SRSF7Q16629 238 aaKnown RBP eCLIP7.45□□□□□ -1.22
CPSF7-217ENST00000537162 WDR38Q5JTN6 314 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 INTS11Q5TA45 600 aaKnown RBP7.45□□□□□ -1.22
CPSF7-217ENST00000537162 MKXQ8IYA7 352 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 OSR2Q8N2R0 312 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 SLC26A10Q8NG04 563 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 OR6S1Q8NH40 331 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 RPS4Y2Q8TD47 263 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 L3HYPDHQ96EM0 354 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 ZNF582Q96NG8 517 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-217ENST00000537162 TRNT1Q96Q11 434 aaKnown RBP7.45□□□□□ -1.22
CPSF7-217ENST00000537162 DUSP26Q9BV47 211 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 MRPL13Q9BYD1 178 aaKnown RBP7.45□□□□□ -1.22
CPSF7-217ENST00000537162 MTHFD2LQ9H903 347 aaPredicted RBP7.45□□□□□ -1.22
CPSF7-217ENST00000537162 VNN3Q9NY84 501 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 TAS2R5Q9NYW4 299 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 TMEM216Q9P0N5 145 aa7.45□□□□□ -1.22
CPSF7-217ENST00000537162 FAM90A8PA6NJQ4 464 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 SLC28A1O00337 649 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 ACOT8O14734 319 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 GSTA2P09210 222 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 GP9P14770 177 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 PAICSP22234 425 aaKnown RBP7.44□□□□□ -1.22
CPSF7-217ENST00000537162 LAP3P28838 519 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 PRKAA2P54646 552 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 CLRN1P58418 232 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 GNA13Q14344 377 aa7.44□□□□□ -1.22
CPSF7-217ENST00000537162 ABCA11PQ4W5N1 156 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms