RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 UBXN8O00124 270 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 UBE2CO00762 179 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 RAD51DO75771 328 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 PIAS1O75925 651 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 STAMBPO95630 424 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 TTC4O95801 387 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 ZNF17P17021 662 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 GGT1P19440 569 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 CSNK2A2P19784 350 aaPredicted RBP4.27□□□□□ -1.73
CLIP1-207ENST00000536634 EEF1B2P24534 225 aaKnown RBP4.27□□□□□ -1.73
CLIP1-207ENST00000536634 PTAFRP25105 342 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 SFTPDP35247 375 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 KRT20P35900 424 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 ARFIP1P53367 373 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 MS4A2Q01362 244 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 PLPPR5Q32ZL2 321 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 HSP90B2PQ58FF3 399 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 CDKL4Q5MAI5 379 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 SLC48A1Q6P1K1 146 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 FCRLAQ7L513 359 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 Q8N377 158 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 GTPBP8Q8N3Z3 284 aaPredicted RBP4.27□□□□□ -1.73
CLIP1-207ENST00000536634 RNF10Q8N5U6 811 aaKnown RBP4.27□□□□□ -1.73
CLIP1-207ENST00000536634 ZNF433Q8N7K0 673 aaPredicted RBP4.27□□□□□ -1.73
CLIP1-207ENST00000536634 ZDHHC22Q8N966 263 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 OR9A2Q8NGT5 310 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 UBTD2Q8WUN7 234 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 OSTF1Q92882 214 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 MUCL1Q96DR8 90 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 SLC6A7Q99884 636 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 OVOL2Q9BRP0 275 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 C1QTNF6Q9BXI9 259 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 HOXD1Q9GZZ0 328 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 PTGES2Q9H7Z7 377 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 COQ10BQ9H8M1 238 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 LPAR2Q9HBW0 351 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 FAM120CQ9NX05 1096 aaKnown RBP4.27□□□□□ -1.73
CLIP1-207ENST00000536634 PAQR5Q9NXK6 330 aaPredicted RBP4.27□□□□□ -1.73
CLIP1-207ENST00000536634 TXNDC16Q9P2K2 825 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 ABCG2Q9UNQ0 655 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 MGAT4BQ9UQ53 548 aa4.27□□□□□ -1.73
CLIP1-207ENST00000536634 ARHGAP32A7KAX9 2087 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 GOLGA6L10A6NI86 522 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 LYNX1G3V0Z9 82 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 FOXE1O00358 373 aaPredicted RBP4.26□□□□□ -1.73
CLIP1-207ENST00000536634 EFNA2O43921 213 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 SEMA3DO95025 777 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 UTS2O95399 124 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 ANGPTL1O95841 491 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 IGKV1D-16P01601 117 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 IGHV3-9P01782 118 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 YES1P07947 543 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 LYNX1P0DP58 116 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 PGCP20142 388 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 GIFP27352 417 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 RBMXP38159 391 aaKnown RBP4.26□□□□□ -1.73
CLIP1-207ENST00000536634 RFX3P48380 749 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 CARD18P57730 90 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 UBA52P62987 128 aaKnown RBP4.26□□□□□ -1.73
CLIP1-207ENST00000536634 CHRNB3Q05901 458 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 COX10Q12887 443 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 MORF4L2Q15014 288 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 STEAP4Q687X5 459 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 P2RY8Q86VZ1 359 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 CARM1Q86X55 608 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 ZCCHC24Q8N2G6 241 aaKnown RBP4.26□□□□□ -1.73
CLIP1-207ENST00000536634 TEX9Q8N6V9 391 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 LRTM2Q8N967 370 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 WDR31Q8NA23 367 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 GATSQ8NAP1 163 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 ZNF540Q8NDQ6 660 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 OR7G2Q8NG99 324 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 FAM110BQ8TC76 370 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 ZNF675Q8TD23 568 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 ZNF75CPQ92670 426 aaPredicted RBP4.26□□□□□ -1.73
CLIP1-207ENST00000536634 TMEM186Q96B77 213 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 TM4SF18Q96CE8 201 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 ALG9Q9H6U8 611 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 MED17Q9NVC6 651 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 NDE1Q9NXR1 346 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 OPTCQ9UBM4 332 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 CHMP2BQ9UQN3 213 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 RNF11Q9Y3C5 154 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 OR10H1Q9Y4A9 318 aa4.26□□□□□ -1.73
CLIP1-207ENST00000536634 A0A087WZY1 265 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 B4DSR2 109 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 SUPT3HB4E1H0 165 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 G3V2L1 256 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 SUPT3HO75486 399 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 IGFBP1P08833 259 aaPredicted RBP4.25□□□□□ -1.73
CLIP1-207ENST00000536634 PABPC4LP0CB38 370 aaKnown RBP4.25□□□□□ -1.73
CLIP1-207ENST00000536634 ADRA2CP18825 462 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 ELK3P41970 407 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 ATP6V0D1P61421 351 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 SNRPD2P62316 118 aaKnown RBP4.25□□□□□ -1.73
CLIP1-207ENST00000536634 MRPS22P82650 360 aaKnown RBP4.25□□□□□ -1.73
CLIP1-207ENST00000536634 FOXF1Q12946 379 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 OPCMLQ14982 345 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 CPTPQ5TA50 214 aa4.25□□□□□ -1.73
CLIP1-207ENST00000536634 LIPJQ5W064 366 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms