RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 PTTG3PQ9NZH4 202 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 CHRNA9Q9UGM1 479 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 CENPEQ02224 2701 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 ZZEF1O43149 2961 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 ACOD1A6NK06 481 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 TNFSF11O14788 317 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 CD2P06729 351 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 PATE4P0C8F1 98 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 CASRP41180 1078 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 CRYBB2P43320 205 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 HMGA2P52926 109 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 CLDN12P56749 244 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 SKP2Q13309 424 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 MFSD13AQ14CX5 517 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 CEBPEQ15744 281 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 KLHL26Q53HC5 615 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 SFRP5Q5T4F7 317 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 OPN5Q6U736 354 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 LIX1LQ8IVB5 337 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 NANOGP1Q8N7R0 232 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 TSEN15Q8WW01 171 aaKnown RBP7.39□□□□□ -1.23
ABCA4-207ENST00000536513 PPP1R14AQ96A00 147 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 SGCZQ96LD1 299 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 CDC6Q99741 560 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 GABARAPL3Q9BY60 117 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 ADAM19Q9H013 955 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 RAB33BQ9H082 229 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 ELL3Q9HB65 397 aaPredicted RBP7.39□□□□□ -1.23
ABCA4-207ENST00000536513 NOX3Q9HBY0 568 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 MED17Q9NVC6 651 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 KCND3Q9UK17 655 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 ZNF337Q9Y3M9 751 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 EML5Q05BV3 1969 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 A0A087WUJ7 227 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 TRBV2A0A0J9YWF9 115 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 SURF4O15260 269 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 KLF7O75840 302 aaPredicted RBP7.39□□□□□ -1.23
ABCA4-207ENST00000536513 TDGF1P13385 188 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 S100A11P31949 105 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 CDKN2AP42771 156 aaKnown RBP7.39□□□□□ -1.23
ABCA4-207ENST00000536513 PTH2RP49190 550 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 CLRN1P58418 232 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 BTG1P62324 171 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 FAM209BQ5JX69 171 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 PDSS1Q5T2R2 415 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 KCTD9Q7L273 389 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 FAM220AQ7Z4H9 259 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 LRRC28Q86X40 367 aaPredicted RBP7.39□□□□□ -1.23
ABCA4-207ENST00000536513 ADGRG3Q86Y34 549 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 CMIPQ8IY22 773 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 FCAMRQ8WWV6 532 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 ADAMTS14Q8WXS8 1223 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 GCDHQ92947 438 aaPredicted RBP7.39□□□□□ -1.23
ABCA4-207ENST00000536513 PTP4A1Q93096 173 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 ALG12Q9BV10 488 aa7.39□□□□□ -1.23
ABCA4-207ENST00000536513 NKX6-2Q9C056 277 aaPredicted RBP7.39□□□□□ -1.23
ABCA4-207ENST00000536513 COA3Q9Y2R0 106 aaPredicted RBP7.39□□□□□ -1.23
ABCA4-207ENST00000536513 ZFHX4Q86UP3 3567 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 IGKV3D-11A0A0A0MRZ8 115 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 MEIS3P1A6NDR6 274 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 ANXA2P2A6NMY6 339 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 NPIPA2E9PIF3 369 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 NPIPA3F8WFD2 350 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 RGS9O75916 674 aaPredicted RBP7.38□□□□□ -1.23
ABCA4-207ENST00000536513 MAS1P04201 325 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 LIPCP11150 499 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 ZNF35P13682 527 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 G0S2P27469 103 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 S100A2P29034 98 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 PNLIPRP2P54317 469 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 CLDN17P56750 224 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 DCAF7P61962 342 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 DGCR2P98153 550 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 LGALSLQ3ZCW2 172 aaPredicted RBP7.38□□□□□ -1.23
ABCA4-207ENST00000536513 TMEM69Q5SWH9 247 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 BRICD5Q6PL45 260 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 OR5M9Q8NGP3 310 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 ZNRF4Q8WWF5 429 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 MARVELD1Q9BSK0 173 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 GABARAPL1Q9H0R8 117 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 NBEAQ8NFP9 2946 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 A0A087WV48 116 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 F5H5K5 113 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 CXCL13O43927 109 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 RAMP1O60894 148 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 ITGB2P05107 769 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 PNMTP11086 282 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 TBXA2RP21731 343 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 ZP3P21754 424 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 GDNFP39905 211 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 MYBPHQ13203 477 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 ZNF273Q14593 569 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 GTPBP8Q8N3Z3 284 aaPredicted RBP7.38□□□□□ -1.23
ABCA4-207ENST00000536513 PLPP5Q8NEB5 264 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 RNASE11Q8TAA1 199 aaKnown RBP7.38□□□□□ -1.23
ABCA4-207ENST00000536513 MAFIPQ8WZ33 124 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 NR4A3Q92570 626 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 ZPBPQ9BS86 351 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 WNT5BQ9H1J7 359 aa7.38□□□□□ -1.23
ABCA4-207ENST00000536513 TCF7L1Q9HCS4 588 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms