RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 SOSTQ9BQB4 213 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 EBF4Q9BQW3 602 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CCDC32Q9BV29 185 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 FUNDC2Q9BWH2 189 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CHID1Q9BWS9 393 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 REG4Q9BYZ8 158 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 BCL2L14Q9BZR8 327 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 TM6SF2Q9BZW4 377 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 ROGDIQ9GZN7 287 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 DSN1Q9H410 356 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 DHX35Q9H5Z1 703 aaKnown RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 RNF121Q9H920 327 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 EFCAB1Q9HAE3 211 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 MRPL47Q9HD33 250 aaKnown RBP2.77□□□□□ -1.97
USP48-215ENST00000534705 RAB9BQ9NP90 201 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 TMEM9BQ9NQ34 198 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 RPS10P5Q9NQ39 176 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 AGPAT4Q9NRZ5 378 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 RDH8Q9NYR8 311 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CRLS1Q9UJA2 301 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 ANAPC7Q9UJX3 599 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 FOXJ3Q9UPW0 622 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CA5BQ9Y2D0 317 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 KLK4Q9Y5K2 254 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 CHD6Q8TD26 2715 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 EML6Q6ZMW3 1958 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 AHCTF1Q8WYP5 2266 aa2.77□□□□□ -1.97
USP48-215ENST00000534705 A0A087WZ39 114 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 HEATR9A2RTY3 570 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 ARGFXA6NJG6 315 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 ACOD1A6NK06 481 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 ARPC1BO15143 372 aaKnown RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 BCL2L11O43521 198 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 EIF1BO60739 113 aaKnown RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 SAP30O75446 220 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 PSIP1O75475 530 aaKnown RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 PIAS1O75925 651 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 SCGNO76038 276 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 OR4F21O95013 312 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 SNAP29O95721 258 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 LDOC1O95751 146 aaPredicted RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 OTCP00480 354 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 FTH1P02794 183 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 MT-ND1P03886 318 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 GNAO1P09471 354 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 HIST1H2AGP0C0S8 130 aaPredicted RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 PSKH1P11801 424 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 GFAPP14136 432 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 GP9P14770 177 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 CSRP1P21291 193 aaKnown RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 ZP3P21754 424 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 KDELR1P24390 212 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 BMI1P35226 326 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 EIF1P41567 113 aaKnown RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 PTGFRP43088 359 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 MAGEA6P43360 314 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 RGS4P49798 205 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 MEOX2P50222 304 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 PPT1P50897 306 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 RAB13P51153 203 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 CCL11P51671 97 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 ARHGDIAP52565 204 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 AQP5P55064 265 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 CDH6P55285 790 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 CLDN17P56750 224 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 OTUD4Q01804 1114 aaKnown RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 ACY1Q03154 408 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 RGS1Q08116 209 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 SLC10A7Q0GE19 358 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 PDIA2Q13087 525 aaKnown RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 GRK1Q15835 563 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 SGCAQ16586 387 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 AANATQ16613 207 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 DGUOKQ16854 277 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 MICAQ29983 383 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 TMEM52BQ4KMG9 183 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 FAM106AQ4KMX7 169 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 HIGD2BQ4VC39 106 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 GPAT3Q53EU6 434 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 AGKQ53H12 422 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 PABPC1L2AQ5JQF8 200 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 SPANXN2Q5MJ10 180 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 N4BP2L1Q5TBK1 243 aaPredicted RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 SEL1L2Q5TEA6 688 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 NXNL2Q5VZ03 156 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 TTC23Q5W5X9 447 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 TMEM225Q6GV28 225 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 OR4C11Q6IEV9 310 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 ZNF770Q6IQ21 691 aaPredicted RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 LAIR2Q6ISS4 152 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 TTC33Q6PID6 262 aaPredicted RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 CLEC2AQ6UVW9 174 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 CBLN3Q6UW01 205 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 EPGNQ6UW88 154 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 C16orf62Q7Z3J2 963 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 YRDCQ86U90 279 aaKnown RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 PAQR7Q86WK9 346 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 HORMAD1Q86X24 394 aa2.76□□□□□ -1.97
USP48-215ENST00000534705 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.76□□□□□ -1.97
USP48-215ENST00000534705 CRLF3Q8IUI8 442 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms