RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CRMP1Q14194 572 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 PCGF3Q3KNV8 242 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 SLC18B1Q6NT16 456 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 CFAP77Q6ZQR2 320 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 LINC00346Q8IVM7 164 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 HS3ST5Q8IZT8 346 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 OR9Q1Q8NGQ5 310 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 TEX47Q8TBZ9 253 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 GTF3AQ92664 365 aaKnown RBP13.12□□□□□ -0.31
CPSF1-210ENST00000532935 RDH5Q92781 318 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 DCLRE1CQ96SD1 692 aaKnown RBP13.12□□□□□ -0.31
CPSF1-210ENST00000532935 COQ7Q99807 217 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 RBM4Q9BWF3 364 aaKnown RBP13.12□□□□□ -0.31
CPSF1-210ENST00000532935 CDADC1Q9BWV3 514 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 HDHD2Q9H0R4 259 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 POFUT1Q9H488 388 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 MRPL22Q9NWU5 206 aaKnown RBP13.12□□□□□ -0.31
CPSF1-210ENST00000532935 CYB5R1Q9UHQ9 305 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 KCNG2Q9UJ96 466 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 TLX2O43763 284 aaPredicted RBP13.11□□□□□ -0.31
CPSF1-210ENST00000532935 IFNGP01579 166 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 ZNF823P16415 610 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 TUBG1P23258 451 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 COL8A2P25067 703 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 ZNF81P51508 661 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 MMP15P51511 669 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 SLC25A1P53007 311 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 MRPS11P82912 194 aaKnown RBP13.11□□□□□ -0.31
CPSF1-210ENST00000532935 ZFP1Q6P2D0 407 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 IQCF1Q8N6M8 205 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 OR51L1Q8NGJ5 315 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 OR2AJ1Q8NGZ0 328 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 ZNRF4Q8WWF5 429 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 YIPF5Q969M3 257 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 NMNAT2Q9BZQ4 307 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 CHODLQ9H9P2 273 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 ZNF556Q9HAH1 456 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 TUBG2Q9NRH3 451 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 CMC2Q9NRP2 79 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 NKIRAS2Q9NYR9 191 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 STARD10Q9Y365 291 aa13.11□□□□□ -0.31
CPSF1-210ENST00000532935 PLSCR5A0PG75 271 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 TVP23AA6NH52 213 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 RIIAD1A6NNX1 92 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 DEAF1O75398 565 aaPredicted RBP13.1□□□□□ -0.31
CPSF1-210ENST00000532935 TIPRLO75663 272 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 GYPBP06028 91 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 IGHV4-31P0DP07 118 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 ANXA8P13928 327 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 ZNF23P17027 643 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 ZNF3P17036 446 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 ACHEP22303 614 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 PRKACGP22612 351 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 GRK5P34947 590 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 LIPAP38571 399 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 RGS6P49758 472 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 CCL8P80075 99 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 PSG7Q13046 419 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 LYPD4Q6UWN0 246 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 COG8Q96MW5 612 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 PITX2Q99697 317 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 NTN4Q9HB63 628 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 YAE1D1Q9NRH1 226 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 CYSLTR2Q9NS75 346 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 CGGBP1Q9UFW8 167 aaPredicted RBP13.1□□□□□ -0.31
CPSF1-210ENST00000532935 SVEP1Q4LDE5 3571 aa13.1□□□□□ -0.31
CPSF1-210ENST00000532935 ZSCAN5BA6NJL1 495 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 J3QW42 95 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 SPRY3O43610 288 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 TIMM8AO60220 97 aaPredicted RBP13.09□□□□□ -0.31
CPSF1-210ENST00000532935 LILRA1O75019 489 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 IGHV1-46P01743 117 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 TACSTD2P09758 323 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 CLUP10909 449 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 OSMP13725 252 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 SPI1P17947 270 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 POU1F1P28069 291 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 FMO3P31513 532 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 ECH1Q13011 328 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 TSTQ16762 297 aaKnown RBP13.09□□□□□ -0.31
CPSF1-210ENST00000532935 RSPO1Q2MKA7 263 aaPredicted RBP13.09□□□□□ -0.31
CPSF1-210ENST00000532935 KRTAP27-1Q3LI81 207 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 C6orf52Q5T4I8 152 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 CYB5R2Q6BCY4 276 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 ACSM5Q6NUN0 579 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 SLC27A4Q6P1M0 643 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 SHQ1Q6PI26 577 aaKnown RBP13.09□□□□□ -0.31
CPSF1-210ENST00000532935 ATG16L2Q8NAA4 619 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 CMBLQ96DG6 245 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 NRBF2Q96F24 287 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 DUS3LQ96G46 650 aaKnown RBP13.09□□□□□ -0.31
CPSF1-210ENST00000532935 ATF6BQ99941 703 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 S100A14Q9HCY8 104 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 PNRC2Q9NPJ4 139 aaKnown RBP13.09□□□□□ -0.31
CPSF1-210ENST00000532935 ZNF275Q9NSD4 429 aaPredicted RBP13.09□□□□□ -0.31
CPSF1-210ENST00000532935 DECR2Q9NUI1 292 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 COMMD3-BMI1R4GMX3 469 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 DYSFO75923 2080 aa13.09□□□□□ -0.31
CPSF1-210ENST00000532935 JMJD1CQ15652 2540 aa13.08□□□□□ -0.32
CPSF1-210ENST00000532935 LRP5LA4QPB2 252 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms