RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 POU3F2P20265 443 aaPredicted RBP13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 ITGA3P26006 1051 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 GDF1P27539 372 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 HTR2CP28335 458 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 GDNFP39905 211 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 CLDN12P56749 244 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 HIST1H3AP68431 136 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 MRPS34P82930 218 aaKnown RBP13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 DGCR2P98153 550 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 FOXO1Q12778 655 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 MFAP5Q13361 173 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 KLF9Q13886 244 aaPredicted RBP13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 SGCAQ16586 387 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 TATDN3Q17R31 274 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 C2orf76Q3KRA6 126 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 HIST2H3PS2Q5TEC6 136 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 CFAP77Q6ZQR2 320 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 HIST2H3AQ71DI3 136 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 PGAP1Q75T13 922 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 GGNQ86UU5 652 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 SIAH3Q8IW03 269 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 ZIC4Q8N9L1 334 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 OR2M7Q8NG81 312 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 SLC7A6Q92536 515 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 ADGRG7Q96K78 797 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 SORCS2Q96PQ0 1159 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 UQCC2Q9BRT2 126 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 TMEM138Q9NPI0 162 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 DEPPQ9NTK1 212 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 TAS2R4Q9NYW5 299 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 ASH2LQ9UBL3 628 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 KNTC1P50748 2209 aa13.07□□□□□ -0.32
ECHDC1-220ENST00000528402 SULT1C2O00338 296 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 P2RY10O00398 339 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 SMAD9O15198 467 aaKnown RBP13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 NEURL1O76050 574 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 WDPCPO95876 746 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 RAB6AP20340 208 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 CCL1P22362 96 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 CDK2P24941 298 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 BDKRB2P30411 391 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 CDAP32320 146 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 POU3F4P49335 361 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 RRADP55042 308 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 GFRA1P56159 465 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 CLDN6P56747 220 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 TAS2R20P59543 309 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 CARTPTQ16568 116 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 RIPPLY2Q5TAB7 128 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 FAM27BQ5VT28 67 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 ABLIM2Q6H8Q1 611 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 DOK3Q7L591 496 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 IL22RA1Q8N6P7 574 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 DTX3Q8N9I9 347 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 DNAAF1Q8NEP3 725 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 OR51D1Q8NGF3 324 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 CPT1CQ8TCG5 803 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 NKD1Q969G9 470 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 SLC25A28Q96A46 364 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 ZNF385AQ96PM9 386 aaKnown RBP13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 UCN2Q96RP3 112 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 CACNG6Q9BXT2 260 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 SRXN1Q9BYN0 137 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 ULBP2Q9BZM5 246 aa13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 PNRC2Q9NPJ4 139 aaKnown RBP13.06□□□□□ -0.32
ECHDC1-220ENST00000528402 A0A0G2JMM0 328 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 A0A1W2PPB8 328 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 A0A1W2PRS3 328 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 KIR3DP1A8MWS1 328 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 KLRC4-KLRK1H3BQV0 150 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 CYTIPO60759 359 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 SCGNO76038 276 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 TCRBP04435 133 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 ITGA5P08648 1049 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 RFPL3SP0C7P2 107 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 ARSBP15848 533 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 RAB3AP20336 220 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 FAUP35544 74 aaKnown RBP13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 EIF1AXP47813 144 aaKnown RBP13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 SOX8P57073 446 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 CD300CQ08708 224 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 ECH1Q13011 328 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 OR1C1Q15619 314 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 STK11Q15831 433 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 FAM189A2Q15884 450 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 BCL2A1Q16548 175 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 WIPI1Q5MNZ9 446 aaPredicted RBP13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 ELFN2Q5R3F8 820 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 SPINK14Q6IE38 97 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 BTN2A1Q7KYR7 527 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 C10orf35Q96D05 121 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 ZNF416Q9BWM5 594 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 RBM24Q9BX46 236 aaKnown RBP13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 EMC3Q9P0I2 261 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 KLF13Q9Y2Y9 288 aaPredicted RBP13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 FLVCR1Q9Y5Y0 555 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 GGT3PA6NGU5 568 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 OR6C65A6NJZ3 312 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 ZNF716A6NP11 495 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 CTAG2O75638 210 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms