RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CRYBA1P05813 215 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 CCL5P13501 91 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 ICAM2P13598 275 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 CTGFP29279 349 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 MPGP29372 298 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 DVL1P1P54792 670 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-203ENST00000517490 UBE2KP61086 200 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 PRICKLE4Q2TBC4 344 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 PHF19Q5T6S3 580 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 MOB3CQ70IA8 216 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 DCXRQ7Z4W1 244 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 SLC25A42Q86VD7 318 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 CDC20BQ86Y33 519 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 PUSL1Q8N0Z8 303 aaKnown RBP6.02□□□□□ -1.45
CPNE3-203ENST00000517490 ARRDC1Q8N5I2 433 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 OR4S1Q8NGB4 309 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 SVIPQ8NHG7 77 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 TERB2Q8NHR7 220 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 ST7LQ8TDW4 575 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 FAM3CQ92520 227 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 RSC1A1Q92681 617 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 TOMM40LQ969M1 308 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 SLC46A1Q96NT5 459 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 SLC5A7Q9GZV3 580 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 FN3KRPQ9HA64 309 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 SPACA1Q9HBV2 294 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 RAB18Q9NP72 206 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 PLEKHJ1Q9NW61 149 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 ATXN7L1Q9ULK2 861 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-203ENST00000517490 ICAM5Q9UMF0 924 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 B9D1Q9UPM9 204 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 TMED7-TICAM2A0A0A6YYA0 188 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 PIN1P1O15428 100 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 YKT6O15498 198 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 HCRTR1O43613 425 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 GSTP1P09211 210 aaKnown RBP6.02□□□□□ -1.45
CPNE3-203ENST00000517490 TMIGD3P0DMS9 266 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-203ENST00000517490 SPP1P10451 314 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 ALOX5APP20292 161 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 RPL12P30050 165 aaKnown RBP6.02□□□□□ -1.45
CPNE3-203ENST00000517490 GJA4P35212 333 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 NANOS3P60323 173 aaKnown RBP6.02□□□□□ -1.45
CPNE3-203ENST00000517490 ZP2Q05996 745 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 ZNF141Q15928 474 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 ACKR1Q16570 336 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 FAM78AQ5JUQ0 283 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 LILRA6Q6PI73 481 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 GLIPR1L1Q6UWM5 242 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 UEVLDQ8IX04 471 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 SLC30A7Q8NEW0 376 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 OR52N5Q8NH56 324 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 BAHD1Q8TBE0 780 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-203ENST00000517490 SEH1LQ96EE3 360 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 KIRREL1Q96J84 757 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 OR11A1Q9GZK7 315 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 CHST6Q9GZX3 395 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 OR10A2Q9H208 303 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 SEMA6CQ9H3T2 930 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 C12orf49Q9H741 205 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 PLEKHA2Q9HB19 425 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 MMP25Q9NPA2 562 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 UFSP2Q9NUQ7 469 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 DNAJB11Q9UBS4 358 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 TMED7Q9Y3B3 224 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 STRAPQ9Y3F4 350 aaKnown RBP6.02□□□□□ -1.45
CPNE3-203ENST00000517490 RHBDD3Q9Y3P4 386 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 PQLC2LA1A4F0 135 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 A8MVM7 634 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 UMAD1C9J7I0 102 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 EIF4E2O60573 245 aaKnown RBP6.02□□□□□ -1.45
CPNE3-203ENST00000517490 ITGB2P05107 769 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 CRHP06850 196 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 CD96P40200 585 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 RABIFP47224 123 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 CAV2P51636 162 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 NAAAQ02083 359 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 ERV3-1Q14264 604 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 NUMA1Q14980 2115 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 IGSF11Q5DX21 431 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 NKAIN2Q5VXU1 208 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 PRSS54Q6PEW0 395 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 SCGB1C1Q8TD33 95 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 NMES1Q9C002 83 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 TMPRSS5Q9H3S3 457 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 DCAF16Q9NXF7 216 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 GDE1Q9NZC3 331 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 SLC5A6Q9Y289 635 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 COA3Q9Y2R0 106 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-203ENST00000517490 UBE2J1Q9Y385 318 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-203ENST00000517490 FLVCR1Q9Y5Y0 555 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 TRAV8-7A0A075B6U6 113 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 TRBV5-5A0A0J9YX44 114 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 CENPVL1A0A0U1RR11 272 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 A0A1B0GTH9 108 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 DNASE2O00115 360 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-203ENST00000517490 TO15178 435 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 MBTPS2O43462 519 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 LRP3O75074 770 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 AKR7A3O95154 331 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 HOXB1P14653 301 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms