RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 A0A1W2PR80 420 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 OR6C68A6NDL8 312 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 A6NIZ1 184 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 DHHO43323 396 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 SC5DO75845 299 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 GLCEO94923 617 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 CD3EP07766 207 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 QDPRP09417 244 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 CLUP10909 449 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 SPI1P17947 270 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 PTAFRP25105 342 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 CD40LGP29965 261 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 RPL4P36578 427 aaKnown RBP7.26□□□□□ -1.25
CCL28-204ENST00000514421 ACVR1BP36896 505 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 CDKN2AP42771 156 aaKnown RBP7.26□□□□□ -1.25
CCL28-204ENST00000514421 CENPAP49450 140 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 CLRN1P58418 232 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 UBE2NP61088 152 aaKnown RBP7.26□□□□□ -1.25
CCL28-204ENST00000514421 RAP1BP61224 184 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 RPL27P61353 136 aaKnown RBP7.26□□□□□ -1.25
CCL28-204ENST00000514421 RAP1AP62834 184 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 ZNF85Q03923 595 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 MELKQ14680 651 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 TRAM1Q15629 374 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 HIST3H3Q16695 136 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 CDONQ4KMG0 1287 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 HIKESHIQ53FT3 197 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 ZNF684Q5T5D7 378 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 TMEM108Q6UXF1 575 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 ZNF627Q7L945 461 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 SHFQ7M4L6 423 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 WDFY1Q8IWB7 410 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 CYB561A3Q8NBI2 242 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 OR4K13Q8NH42 304 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 MCFD2Q8NI22 146 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 ZNF519Q8TB69 540 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 FNDC8Q8TC99 324 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 SPRYD4Q8WW59 207 aaPredicted RBP7.26□□□□□ -1.25
CCL28-204ENST00000514421 ASB10Q8WXI3 467 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 SLC25A46Q96AG3 418 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 ZNF837Q96EG3 531 aaPredicted RBP7.26□□□□□ -1.25
CCL28-204ENST00000514421 RADILQ96JH8 1075 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 WDFY2Q96P53 400 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 ALKBH3Q96Q83 286 aaPredicted RBP7.26□□□□□ -1.25
CCL28-204ENST00000514421 MNTQ99583 582 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 TMEM204Q9BSN7 226 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 ALG12Q9BV10 488 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 ALG8Q9BVK2 526 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 C1QTNF6Q9BXI9 259 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 ULBP2Q9BZM5 246 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 RNF167Q9H6Y7 350 aa7.26□□□□□ -1.25
CCL28-204ENST00000514421 MOV10Q9HCE1 1003 aaKnown RBP7.26□□□□□ -1.25
CCL28-204ENST00000514421 TEX15Q9BXT5 2789 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 ARPC4-TTLL3A0A0A6YYG9 625 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 A0A1W2PPR1 153 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 A0A1W2PQL4 384 aaPredicted RBP7.25□□□□□ -1.25
CCL28-204ENST00000514421 DAPL1A0PJW8 107 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 OGG1O15527 345 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 APOL3O95236 402 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 PLAUP00749 431 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 TFP02787 698 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 MT-ND5P03915 603 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 HLA-DPB1P04440 258 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 PGA4P0DJD7 388 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 PGA3P0DJD8 388 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 BMP4P12644 408 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 NR2C1P13056 603 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 CBR1P16152 277 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 ZNF12P17014 697 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 CD40P25942 277 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 SOX6P35712 828 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 ATP6V1E1P36543 226 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 RPS19P39019 145 aaKnown RBP7.25□□□□□ -1.25
CCL28-204ENST00000514421 ZNF83P51522 516 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 ZNF133P52736 654 aaPredicted RBP7.25□□□□□ -1.25
CCL28-204ENST00000514421 ACTA2P62736 377 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 RPS25P62851 125 aaKnown RBP7.25□□□□□ -1.25
CCL28-204ENST00000514421 ERVK-25P63136 954 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 ACTG2P63267 376 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 FABP5Q01469 135 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 ZNF45Q02386 682 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 RUNX1T1Q06455 604 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 CCDC58Q4VC31 144 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 THEM4Q5T1C6 240 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 FAM205BPQ63HN1 556 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 DMKNQ6E0U4 476 aaPredicted RBP7.25□□□□□ -1.25
CCL28-204ENST00000514421 ADAM5Q6NVV9 412 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 SEZ6L2Q6UXD5 910 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 ZNF813Q6ZN06 617 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 ZNF704Q6ZNC4 412 aaPredicted RBP7.25□□□□□ -1.25
CCL28-204ENST00000514421 VASH1Q7L8A9 365 aaPredicted RBP7.25□□□□□ -1.25
CCL28-204ENST00000514421 KCTD20Q7Z5Y7 419 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 CCDC190Q86UF4 302 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 ZBTB46Q86UZ6 589 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 IGFN1Q86VF2 1251 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 FAM169BQ8N8A8 192 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 SYT14Q8NB59 555 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 SDR9C7Q8NEX9 313 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 HAVCR2Q8TDQ0 301 aa7.25□□□□□ -1.25
CCL28-204ENST00000514421 MCHR2Q969V1 340 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms