RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SELENOFO60613 162 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 SLC16A7O60669 478 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 ZNF254O75437 659 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 GPX5O75715 221 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 APOL3O95236 402 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 LALBAP00709 142 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 PLAUP00749 431 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 IL1AP01583 271 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 HSMCR30P0CW71 290 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 LOXP28300 417 aaPredicted RBP9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 PYCR1P32322 319 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 SERPINB10P48595 397 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 ENTPD1P49961 510 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 BIDP55957 195 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 CLDN15P56746 228 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 CLDN20P56880 219 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 RPS3AP61247 264 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 SIRPAP78324 504 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 SPCS2Q15005 226 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 CDK5R1Q15078 307 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 SF3B4Q15427 424 aaKnown RBP eCLIP9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 LIPKQ5VXJ0 399 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 HBMQ6B0K9 141 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 C12orf54Q6X4T0 127 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 IL17RELQ6ZVW7 336 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 GLB1L2Q8IW92 636 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 GCNT2Q8N0V5 402 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 ZIC4Q8N9L1 334 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 OR10D3Q8NH80 312 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 GATAD2BQ8WXI9 593 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 THRSPQ92748 146 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 SMIM19Q96E16 107 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 PELI1Q96FA3 418 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 TXNDC15Q96J42 360 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 PGLYRP3Q96LB9 341 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 TSSK2Q96PF2 358 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 UCN2Q96RP3 112 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 SRXN1Q9BYN0 137 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 PRDM14Q9GZV8 571 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 KCNN2Q9H2S1 579 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 TMEM185BQ9H7F4 350 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 MRPL22Q9NWU5 206 aaKnown RBP9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 MED29Q9NX70 200 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 SSR3Q9UNL2 185 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 COPS3Q9UNS2 423 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 ZNF175Q9Y473 711 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 FLVCR1Q9Y5Y0 555 aa9.17□□□□□ -0.94
PDLIM5-217ENST00000512274 YLPM1P49750 1951 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 SLC35F4A4IF30 521 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 METTL15A6NJ78 407 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 ZNF726A6NNF4 738 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 ZNF724A8MTY0 619 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 A8MXE2 369 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 TNFSF11O14788 317 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 UPK3AO75631 287 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 GATBO75879 557 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 CLPXO76031 633 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 PLGP00747 810 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 SERPINA3P01011 423 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 OPN1LWP04000 364 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 ZNF182P17025 639 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 EGR1P18146 543 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 LAP3P28838 519 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 CCR9P51686 369 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 GBX2P52951 348 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 OR12D2P58182 307 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 LSM6P62312 80 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 MELKQ14680 651 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 DGUOKQ16854 277 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 LCE2DQ5TA82 110 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 SLC18B1Q6NT16 456 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 KCTD18Q6PI47 426 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 B3GLCTQ6Y288 498 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 SSX6Q7RTT6 188 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 ZNF679Q8IYX0 411 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 ZNF511Q8NB15 262 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 RNF128Q8TEB7 428 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 SNX33Q8WV41 574 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 RPL3LQ92901 407 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 RNF166Q96A37 237 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 WDYHV1Q96HA8 205 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 C4orf36Q96KX1 117 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 OR2M2Q96R28 347 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 OR8B4Q96RC9 309 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 SFXN3Q9BWM7 321 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 LINC00470Q9BZP3 86 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 SLIRPQ9GZT3 109 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 SHARPINQ9H0F6 387 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 OR51E2Q9H255 320 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 DCSTAMPQ9H295 470 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 ISG20L2Q9H9L3 353 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 CALHM2Q9HA72 323 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 BCO1Q9HAY6 547 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 SRA1Q9HD15 236 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 LAMP3Q9UQV4 416 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 GSTK1Q9Y2Q3 226 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 ALPK2Q86TB3 2170 aa9.16□□□□□ -0.94
PDLIM5-217ENST00000512274 A0A075B6Q4 140 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 H0YC42 278 aa9.15□□□□□ -0.94
PDLIM5-217ENST00000512274 H7C1C5 153 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms