RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 YIPF5Q969M3 257 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 SLCO4A1Q96BD0 722 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 NMNAT2Q9BZQ4 307 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 POFUT1Q9H488 388 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 PDP1Q9P0J1 537 aaPredicted RBP19.29■□□□□ 0.68
SNIP1-203ENST00000493916 DNAJB9Q9UBS3 223 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 ABCA1O95477 2261 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 A8MV72 311 aaPredicted RBP19.28■□□□□ 0.68
SNIP1-203ENST00000493916 LILRA1O75019 489 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 E2F6O75461 281 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 CRLF1O75462 422 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 RP2O75695 350 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 IFNGP01579 166 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 ADH4P08319 380 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 DBHP09172 617 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 COL8A2P25067 703 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 ECH1Q13011 328 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 PSG7Q13046 419 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 CRMP1Q14194 572 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 ZMAT1Q5H9K5 638 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 LINC00346Q8IVM7 164 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 OR2AJ1Q8NGZ0 328 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 HPS1Q92902 700 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 CDADC1Q9BWV3 514 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 MMADHCQ9H3L0 296 aaPredicted RBP19.28■□□□□ 0.68
SNIP1-203ENST00000493916 CMC2Q9NRP2 79 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 STARD10Q9Y365 291 aa19.28■□□□□ 0.68
SNIP1-203ENST00000493916 ZSCAN5BA6NJL1 495 aa19.27■□□□□ 0.68
SNIP1-203ENST00000493916 IGHV1-46P01743 117 aa19.27■□□□□ 0.68
SNIP1-203ENST00000493916 ZNF16P17020 682 aaPredicted RBP19.27■□□□□ 0.68
SNIP1-203ENST00000493916 KITLGP21583 273 aa19.27■□□□□ 0.68
SNIP1-203ENST00000493916 GRK5P34947 590 aa19.27■□□□□ 0.68
SNIP1-203ENST00000493916 TMEM33P57088 247 aa19.27■□□□□ 0.68
SNIP1-203ENST00000493916 OR9Q1Q8NGQ5 310 aa19.27■□□□□ 0.68
SNIP1-203ENST00000493916 ZNRF4Q8WWF5 429 aa19.27■□□□□ 0.68
SNIP1-203ENST00000493916 DIRC2Q96SL1 478 aa19.27■□□□□ 0.68
SNIP1-203ENST00000493916 PNRC2Q9NPJ4 139 aaKnown RBP19.27■□□□□ 0.68
SNIP1-203ENST00000493916 ZNF275Q9NSD4 429 aaPredicted RBP19.27■□□□□ 0.68
SNIP1-203ENST00000493916 YLPM1P49750 1951 aaKnown RBP19.26■□□□□ 0.67
SNIP1-203ENST00000493916 RIIAD1A6NNX1 92 aa19.26■□□□□ 0.67
SNIP1-203ENST00000493916 H3BN98 237 aa19.26■□□□□ 0.67
SNIP1-203ENST00000493916 TIMM8AO60220 97 aaPredicted RBP19.26■□□□□ 0.67
SNIP1-203ENST00000493916 ZNF823P16415 610 aa19.26■□□□□ 0.67
SNIP1-203ENST00000493916 ZNF3P17036 446 aa19.26■□□□□ 0.67
SNIP1-203ENST00000493916 CRYBB2P43320 205 aa19.26■□□□□ 0.67
SNIP1-203ENST00000493916 GPR6P46095 362 aaPredicted RBP19.26■□□□□ 0.67
SNIP1-203ENST00000493916 TRIP10Q15642 601 aa19.26■□□□□ 0.67
SNIP1-203ENST00000493916 OR5L1Q8NGL2 311 aa19.26■□□□□ 0.67
SNIP1-203ENST00000493916 APOBEC3DQ96AK3 386 aaPredicted RBP19.26■□□□□ 0.67
SNIP1-203ENST00000493916 PITX2Q99697 317 aa19.26■□□□□ 0.67
SNIP1-203ENST00000493916 ATF6BQ99941 703 aa19.26■□□□□ 0.67
SNIP1-203ENST00000493916 ZNF556Q9HAH1 456 aa19.26■□□□□ 0.67
SNIP1-203ENST00000493916 SAP30LQ9HAJ7 183 aa19.26■□□□□ 0.67
SNIP1-203ENST00000493916 DECR2Q9NUI1 292 aa19.26■□□□□ 0.67
SNIP1-203ENST00000493916 TMEM160Q9NX00 188 aa19.26■□□□□ 0.67
SNIP1-203ENST00000493916 PURGQ9UJV8 347 aaKnown RBP19.26■□□□□ 0.67
SNIP1-203ENST00000493916 ZDHHC8Q9ULC8 765 aa19.26■□□□□ 0.67
SNIP1-203ENST00000493916 IGHV1-69-2A0A0G2JMI3 117 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 LRP5LA4QPB2 252 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 SPRY3O43610 288 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 CD55P08174 381 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 ANXA8P13928 327 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 SPI1P17947 270 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 ERFP50548 548 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 TSTQ16762 297 aaKnown RBP19.25■□□□□ 0.67
SNIP1-203ENST00000493916 RSPO1Q2MKA7 263 aaPredicted RBP19.25■□□□□ 0.67
SNIP1-203ENST00000493916 FBXW12Q6X9E4 464 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 COLCA1Q6ZS62 124 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 HS3ST5Q8IZT8 346 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 IQCF1Q8N6M8 205 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 OR51L1Q8NGJ5 315 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 PTP4A1Q93096 173 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 HAVCR1Q96D42 359 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 MSI2Q96DH6 328 aaKnown RBP19.25■□□□□ 0.67
SNIP1-203ENST00000493916 NRBF2Q96F24 287 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 NTN4Q9HB63 628 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 COMMD3-BMI1R4GMX3 469 aa19.25■□□□□ 0.67
SNIP1-203ENST00000493916 TVP23AA6NH52 213 aa19.24■□□□□ 0.67
SNIP1-203ENST00000493916 TPD52L2O43399 206 aaKnown RBP19.24■□□□□ 0.67
SNIP1-203ENST00000493916 DEAF1O75398 565 aaPredicted RBP19.24■□□□□ 0.67
SNIP1-203ENST00000493916 OSMP13725 252 aa19.24■□□□□ 0.67
SNIP1-203ENST00000493916 RAC2P15153 192 aa19.24■□□□□ 0.67
SNIP1-203ENST00000493916 FMO3P31513 532 aa19.24■□□□□ 0.67
SNIP1-203ENST00000493916 BLVRAP53004 296 aa19.24■□□□□ 0.67
SNIP1-203ENST00000493916 PCK2Q16822 640 aa19.24■□□□□ 0.67
SNIP1-203ENST00000493916 SLC27A4Q6P1M0 643 aa19.24■□□□□ 0.67
SNIP1-203ENST00000493916 SHQ1Q6PI26 577 aaKnown RBP19.24■□□□□ 0.67
SNIP1-203ENST00000493916 UTP4Q969X6 686 aaKnown RBP19.24■□□□□ 0.67
SNIP1-203ENST00000493916 CMBLQ96DG6 245 aa19.24■□□□□ 0.67
SNIP1-203ENST00000493916 C1orf159Q96HA4 380 aa19.24■□□□□ 0.67
SNIP1-203ENST00000493916 MAP6Q96JE9 813 aa19.24■□□□□ 0.67
SNIP1-203ENST00000493916 C1QTNF5Q9BXJ0 243 aa19.24■□□□□ 0.67
SNIP1-203ENST00000493916 EGLN1Q9GZT9 426 aa19.24■□□□□ 0.67
SNIP1-203ENST00000493916 DDX28Q9NUL7 540 aaKnown RBP19.24■□□□□ 0.67
SNIP1-203ENST00000493916 GYPBP06028 91 aa19.23■□□□□ 0.67
SNIP1-203ENST00000493916 ACSM4P0C7M7 580 aa19.23■□□□□ 0.67
SNIP1-203ENST00000493916 IL2RGP31785 369 aa19.23■□□□□ 0.67
SNIP1-203ENST00000493916 CDK5R2Q13319 367 aa19.23■□□□□ 0.67
SNIP1-203ENST00000493916 LYPD4Q6UWN0 246 aa19.23■□□□□ 0.67
SNIP1-203ENST00000493916 USP51Q70EK9 711 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms