RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 TMEM186Q96B77 213 aa11.88□□□□□ -0.51
VTI1A-206ENST00000489142 ELMOD3Q96FG2 381 aa11.88□□□□□ -0.51
VTI1A-206ENST00000489142 WACQ9BTA9 647 aa11.88□□□□□ -0.51
VTI1A-206ENST00000489142 EGLN1Q9GZT9 426 aa11.88□□□□□ -0.51
VTI1A-206ENST00000489142 ZNF665Q9H7R5 613 aa11.88□□□□□ -0.51
VTI1A-206ENST00000489142 WDR76Q9H967 626 aa11.88□□□□□ -0.51
VTI1A-206ENST00000489142 KLHL21Q9UJP4 597 aa11.88□□□□□ -0.51
VTI1A-206ENST00000489142 CDH10Q9Y6N8 788 aa11.88□□□□□ -0.51
VTI1A-206ENST00000489142 CCNB2O95067 398 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 SOX14O95416 240 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 GASTP01350 101 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 PSKH1P11801 424 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 CALB2P22676 271 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 RPS27P42677 84 aaKnown RBP11.87□□□□□ -0.51
VTI1A-206ENST00000489142 MAGEA2P43356 314 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 KRTAP24-1Q3LI83 254 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 ZNF770Q6IQ21 691 aaPredicted RBP11.87□□□□□ -0.51
VTI1A-206ENST00000489142 LCN8Q6JVE9 175 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 C1orf174Q8IYL3 243 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 AQP11Q8NBQ7 271 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 GJC3Q8NFK1 279 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 OR52L1Q8NGH7 329 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 OR51L1Q8NGJ5 315 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 OR51F2Q8NH61 342 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 ITLN1Q8WWA0 313 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 ZNRF4Q8WWF5 429 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 TIMD4Q96H15 378 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 DCLRE1CQ96SD1 692 aaKnown RBP11.87□□□□□ -0.51
VTI1A-206ENST00000489142 CYSLTR2Q9NS75 346 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 UBAP1Q9NZ09 502 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 ZDHHC8Q9ULC8 765 aa11.87□□□□□ -0.51
VTI1A-206ENST00000489142 IGHV3-64DA0A0J9YX35 117 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 TVP23AA6NH52 213 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 BHLHE40O14503 412 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 DEAF1O75398 565 aaPredicted RBP11.86□□□□□ -0.51
VTI1A-206ENST00000489142 KRT36O76013 467 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 IGHV2-5P01817 119 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 KITLGP21583 273 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 GGT2P36268 569 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 LIPAP38571 399 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 HMGA2P52926 109 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 HIST1H3AP68431 136 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 COX10Q12887 443 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 CDK5R2Q13319 367 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 TRIM25Q14258 630 aaKnown RBP11.86□□□□□ -0.51
VTI1A-206ENST00000489142 RSPO1Q2MKA7 263 aaPredicted RBP11.86□□□□□ -0.51
VTI1A-206ENST00000489142 ZMAT1Q5H9K5 638 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 HIST2H3PS2Q5TEC6 136 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 OR2T2Q6IF00 324 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 SLC18B1Q6NT16 456 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 HIST2H3AQ71DI3 136 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 ZBTB46Q86UZ6 589 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 BHLHE23Q8NDY6 225 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 OR10AD1Q8NGE0 317 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 OR9Q1Q8NGQ5 310 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 SPATA3Q8NHX4 192 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 TMEM158Q8WZ71 300 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 RAB1CQ92928 201 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 HAVCR1Q96D42 359 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 PITX2Q99697 317 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 GAL3ST1Q99999 423 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 CDADC1Q9BWV3 514 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 HDHD2Q9H0R4 259 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 TBC1D23Q9NUY8 699 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 ARMC1Q9NVT9 282 aa11.86□□□□□ -0.51
VTI1A-206ENST00000489142 MRPL22Q9NWU5 206 aaKnown RBP11.86□□□□□ -0.51
VTI1A-206ENST00000489142 CGGBP1Q9UFW8 167 aaPredicted RBP11.86□□□□□ -0.51
VTI1A-206ENST00000489142 SAMHD1Q9Y3Z3 626 aaKnown RBP11.86□□□□□ -0.51
VTI1A-206ENST00000489142 F5H5K5 113 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 DYNC1I1O14576 645 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 PLPP2O43688 288 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 RGS9O75916 674 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-206ENST00000489142 GYPBP06028 91 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 CD55P08174 381 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 ADH4P08319 380 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 ANOS1P23352 680 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 FAM98BQ52LJ0 330 aaKnown RBP11.85□□□□□ -0.51
VTI1A-206ENST00000489142 FAHD2BQ6P2I3 314 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-206ENST00000489142 PGM2L1Q6PCE3 622 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 NAA40Q86UY6 237 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 PROKR2Q8NFJ6 384 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 OR2AJ1Q8NGZ0 328 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 OR4Q3Q8NH05 313 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 PTP4A1Q93096 173 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 FAHD2AQ96GK7 314 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 COQ7Q99807 217 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 TSSK6Q9BXA6 273 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 TRIM15Q9C019 465 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 MAGIXQ9H6Y5 334 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 METTL17Q9H7H0 456 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-206ENST00000489142 TAS2R1Q9NYW7 299 aa11.85□□□□□ -0.51
VTI1A-206ENST00000489142 WNK2Q9Y3S1 2297 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 H0YL77 283 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 IDH3BO43837 385 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 AVPP01185 164 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 SBK2P0C263 348 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 ACSM4P0C7M7 580 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 RAC2P15153 192 aa11.84□□□□□ -0.51
VTI1A-206ENST00000489142 TRAP1Q12931 704 aaKnown RBP11.84□□□□□ -0.51
VTI1A-206ENST00000489142 OR2T5Q6IEZ7 315 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms