RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 YIPF7Q8N8F6 280 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 SPRYD4Q8WW59 207 aaPredicted RBP14.37□□□□□ -0.11
THBS3-207ENST00000486260 GATAD2BQ8WXI9 593 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 MRPL48Q96GC5 212 aaKnown RBP14.37□□□□□ -0.11
THBS3-207ENST00000486260 MED18Q9BUE0 208 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 FBXL3Q9UKT7 428 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 HCFC1P51610 2035 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 PRR14LQ5THK1 2151 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 IQCMA0A1B0GVH7 501 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 SULT1C4O75897 302 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 ABHD16AO95870 558 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 IGKV3-15P01624 115 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 SERPINA5P05154 406 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 THBDP07204 575 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 SMIM18P0DKX4 95 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 PPP3CBP16298 524 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 ZNF14P17017 642 aaPredicted RBP14.37□□□□□ -0.11
THBS3-207ENST00000486260 PCMT1P22061 227 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 GALK2Q01415 458 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 DOC2BQ14184 412 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 RSPO1Q2MKA7 263 aaPredicted RBP14.37□□□□□ -0.11
THBS3-207ENST00000486260 DEGS2Q6QHC5 323 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 RHOUQ7L0Q8 258 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 SVOPQ8N4V2 548 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 ZNF485Q8NCK3 441 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 OR52N1Q8NH53 320 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 LINC01560Q8TB33 94 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 OR5M11Q96RB7 305 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 COQ7Q99807 217 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 MND1Q9BWT6 205 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 ACOT13Q9NPJ3 140 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 ACOXLQ9NUZ1 547 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 NPAP1Q9NZP6 1156 aa14.37□□□□□ -0.11
THBS3-207ENST00000486260 F5H5K5 113 aa14.36□□□□□ -0.11
THBS3-207ENST00000486260 ZNF254O75437 659 aa14.36□□□□□ -0.11
THBS3-207ENST00000486260 RPP14O95059 124 aaKnown RBP14.36□□□□□ -0.11
THBS3-207ENST00000486260 CCL2P13500 99 aa14.36□□□□□ -0.11
THBS3-207ENST00000486260 STOMP27105 288 aa14.36□□□□□ -0.11
THBS3-207ENST00000486260 ZNF83P51522 516 aa14.36□□□□□ -0.11
THBS3-207ENST00000486260 PRKXP51817 358 aa14.36□□□□□ -0.11
THBS3-207ENST00000486260 RIDAP52758 137 aaKnown RBP14.36□□□□□ -0.11
THBS3-207ENST00000486260 SORDQ00796 357 aa14.36□□□□□ -0.11
THBS3-207ENST00000486260 ECH1Q13011 328 aa14.36□□□□□ -0.11
THBS3-207ENST00000486260 LIPNQ5VXI9 398 aa14.36□□□□□ -0.11
THBS3-207ENST00000486260 WFDC8Q8IUA0 241 aa14.36□□□□□ -0.11
THBS3-207ENST00000486260 SYS1Q8N2H4 156 aa14.36□□□□□ -0.11
THBS3-207ENST00000486260 PELI1Q96FA3 418 aa14.36□□□□□ -0.11
THBS3-207ENST00000486260 LSM2Q9Y333 95 aaKnown RBP14.36□□□□□ -0.11
THBS3-207ENST00000486260 USP9XQ93008 2570 aaPredicted RBP14.36□□□□□ -0.11
THBS3-207ENST00000486260 SPTBN1Q01082 2364 aaKnown RBP14.35□□□□□ -0.11
THBS3-207ENST00000486260 LOC100509620A0A075B734 347 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 MT-ND5P03915 603 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 LCKP06239 509 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 TACSTD2P09758 323 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 COX5BP10606 129 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 CRYGSP22914 178 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 HSD11B1P28845 292 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 PSMB10P40306 273 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 WNT4P56705 351 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 GRB2P62993 217 aaKnown RBP14.35□□□□□ -0.11
THBS3-207ENST00000486260 MED22Q15528 200 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 TBCEQ15813 527 aaPredicted RBP14.35□□□□□ -0.11
THBS3-207ENST00000486260 SEZ6L2Q6UXD5 910 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 KCTD8Q6ZWB6 473 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 FAM220AQ7Z4H9 259 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 KCTD20Q7Z5Y7 419 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 KLBQ86Z14 1044 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 KCNJ15Q99712 375 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 CRNNQ9UBG3 495 aaPredicted RBP14.35□□□□□ -0.11
THBS3-207ENST00000486260 NDRG3Q9UGV2 375 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 COL12A1Q99715 3063 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 RTTNQ86VV8 2226 aa14.35□□□□□ -0.11
THBS3-207ENST00000486260 IGHV1-18A0A0C4DH31 117 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 C19orf84I3L1E1 186 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 M0R1B8 84 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 LALBAP00709 142 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 IGLV1-44P01699 117 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 CCNOP22674 350 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 APLNRP35414 380 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 C1QTNF12Q5T7M4 302 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 NAA40Q86UY6 237 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 FAM169BQ8N8A8 192 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 SLC30A7Q8NEW0 376 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 SSC4DQ8WTU2 575 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 SPTSSAQ969W0 71 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 POM121L2Q96KW2 1035 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 BABAM2Q9NXR7 383 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 GRIP1Q9Y3R0 1128 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 C5orf49A4QMS7 147 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 TUBAL3A6NHL2 446 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 TRIM64CA6NLI5 447 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 E9PI62 339 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 CECR9P0C854 216 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 OTX1P32242 354 aaPredicted RBP14.34□□□□□ -0.11
THBS3-207ENST00000486260 CX3CR1P49238 355 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 GDI2P50395 445 aaKnown RBP14.34□□□□□ -0.11
THBS3-207ENST00000486260 HGFACQ04756 655 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 SPHARQ15513 63 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 NEDD8Q15843 81 aa14.34□□□□□ -0.11
THBS3-207ENST00000486260 KRTAP27-1Q3LI81 207 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms