RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ABCD2Q9UBJ2 740 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 ADGRA3Q8IWK6 1321 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 FANCMQ8IYD8 2048 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 IGLV1-36A0A0B4J1U3 117 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 C1orf232A0A0U1RR37 186 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 A0A1W2PNV4 684 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 CIB4A0PJX0 185 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 LOC110117498-PIK3R3F6TDL0 507 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 PDHXO00330 501 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 EEDO75530 441 aaKnown RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 UGT2B17O75795 530 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 CEACAM4O75871 244 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 PLEKHA8P1O95397 391 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 APOA1P02647 267 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 RPN2P04844 631 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 EIF4EP06730 217 aaKnown RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 CFC1P0CG37 223 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 SLC35E2BP0CK96 405 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 IFNA8P32881 189 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 MAS1LP35410 378 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 RFC3P40938 356 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 CCNG1P51959 295 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 UGT2B15P54855 530 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 UCNP55089 124 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 DLX5P56178 289 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 PAX2Q02962 417 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 ECH1Q13011 328 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 XKR4Q5GH76 650 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 ACTL10Q5JWF8 245 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 C9orf66Q5T8R8 295 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 ZNF324BQ6AW86 544 aaPredicted RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 ACOT7LQ6ZUV0 252 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 SSX9Q7RTT3 188 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 BHLHA9Q7RTU4 235 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 S100A7AQ86SG5 101 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 LRRC34Q8IZ02 419 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 RIBC1Q8N443 379 aaPredicted RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 PGLYRP4Q96LB8 373 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 ILKAPQ9H0C8 392 aaPredicted RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 SLCO1B3Q9NPD5 702 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 TMEM9BQ9NQ34 198 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 TIGARQ9NQ88 270 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 RMND1Q9NWS8 449 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 KIF25Q9UIL4 384 aa2.08□□□□□ -2.08
XRN1-210ENST00000472697 RPL36Q9Y3U8 105 aaKnown RBP2.08□□□□□ -2.08
XRN1-210ENST00000472697 IGHV3-16A0A0C4DH30 117 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 SRRM5B3KS81 715 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 hCG_2039718K7EN88 272 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 SULT1C2O00338 296 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 VAPBO95292 243 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 LYPLA2O95372 231 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 CAVIN2O95810 425 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 CST4P01036 141 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 IGHG1P01857 330 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 COILP38432 576 aaPredicted RBP2.07□□□□□ -2.08
XRN1-210ENST00000472697 CRATP43155 626 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 CRYBA2P53672 197 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 ERVFC1-1P60608 527 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 SP4Q02446 784 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 CALCOCO2Q13137 446 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 LRRC26Q2I0M4 334 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 GCSAMLQ5JQS6 135 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 VAX1Q5SQQ9 334 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 MFSD14CQ5VZR4 134 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 LCN12Q6JVE5 192 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 PRMT9Q6P2P2 845 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 GDPD4Q6W3E5 623 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 SLC35D2Q76EJ3 337 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 TRMT10CQ7L0Y3 403 aaKnown RBP2.07□□□□□ -2.08
XRN1-210ENST00000472697 ABHD13Q7L211 337 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 TMEM25Q86YD3 366 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 MFSD6LQ8IWD5 586 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 ST13P4Q8IZP2 240 aaPredicted RBP2.07□□□□□ -2.08
XRN1-210ENST00000472697 ATPAF2Q8N5M1 289 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 OR2L2Q8NH16 312 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 VSIG2Q96IQ7 327 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 SCGB3A2Q96PL1 93 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 WFDC1Q9HC57 220 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 QPCTLQ9NXS2 382 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 RBAKQ9NYW8 714 aaPredicted RBP2.07□□□□□ -2.08
XRN1-210ENST00000472697 CHD8Q9HCK8 2581 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 ATAD5Q96QE3 1844 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 SPEF2Q9C093 1822 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 BDP1A6H8Y1 2624 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 A0A087WYN8 130 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 A0A1B0GTH9 108 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 ZNF726A6NNF4 738 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 EFCAB7A8K855 629 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 FOXI3A8MTJ6 420 aaPredicted RBP2.07□□□□□ -2.08
XRN1-210ENST00000472697 HIDE1A8MVS5 230 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 TRAPPC3O43617 180 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 LSM8O95777 96 aaKnown RBP2.07□□□□□ -2.08
XRN1-210ENST00000472697 CD74P04233 296 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 PGA4P0DJD7 388 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 PGA3P0DJD8 388 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 CD37P11049 281 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 RNH1P13489 461 aaKnown RBP2.07□□□□□ -2.08
XRN1-210ENST00000472697 PAX1P15863 534 aa2.07□□□□□ -2.08
XRN1-210ENST00000472697 H2AFXP16104 143 aaPredicted RBP2.07□□□□□ -2.08
XRN1-210ENST00000472697 HLA-DMAP28067 261 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms