RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 PKD1L1Q8TDX9 2849 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 IGHV3-64DA0A0J9YX35 117 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 CEACAM18A8MTB9 384 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 AHCYL1O43865 530 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 KHDRBS3O75525 346 aaKnown RBP13.45□□□□□ -0.26
GPC1-206ENST00000455111 NDUFB2O95178 105 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 PSKH1P11801 424 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 GATA3P23771 443 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 CD80P33681 288 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 LSM6P62312 80 aaKnown RBP13.45□□□□□ -0.26
GPC1-206ENST00000455111 SLC3A1Q07837 685 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 FAM201AQ5SY85 155 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 CORO6Q6QEF8 472 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 FBXW12Q6X9E4 464 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 FKBP9P1Q75LS8 142 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 ZER1Q7Z7L7 766 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 JAZF1Q86VZ6 243 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 GLB1L2Q8IW92 636 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 GCDHQ92947 438 aaPredicted RBP13.45□□□□□ -0.26
GPC1-206ENST00000455111 PTP4A1Q93096 173 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 HOPXQ9BPY8 73 aaPredicted RBP13.45□□□□□ -0.26
GPC1-206ENST00000455111 RERGLQ9H628 205 aa13.45□□□□□ -0.26
GPC1-206ENST00000455111 A0A1B0GWJ7 208 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 C5orf63A6NC05 138 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 FOXH1O75593 365 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 PPP1R3DO95685 299 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 CYB5R3P00387 301 aaPredicted RBP13.44□□□□□ -0.26
GPC1-206ENST00000455111 H1F0P07305 194 aaKnown RBP13.44□□□□□ -0.26
GPC1-206ENST00000455111 WNT2P09544 360 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 GSTM3P21266 225 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 NUDT2P50583 147 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 PSME3P61289 254 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 PAX8Q06710 450 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 UNQ6126/PRO20091Q6UXV3 157 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 CFAP77Q6ZQR2 320 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 COLCA1Q6ZS62 124 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 DOK3Q7L591 496 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 OR6V1Q8N148 313 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 RNF148Q8N7C7 305 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 OR52J3Q8NH60 311 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 ZNRF4Q8WWF5 429 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 MEGF10Q96KG7 1140 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 WDR76Q9H967 626 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 TMEM165Q9HC07 324 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 PNRC2Q9NPJ4 139 aaKnown RBP13.44□□□□□ -0.26
GPC1-206ENST00000455111 DCAF13Q9NV06 445 aaKnown RBP13.44□□□□□ -0.26
GPC1-206ENST00000455111 B9D1Q9UPM9 204 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 PPP1R3CQ9UQK1 317 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 AP3M1Q9Y2T2 418 aa13.44□□□□□ -0.26
GPC1-206ENST00000455111 DNAJC9-AS1A6NH13 148 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 XKRYO14609 159 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 GSTA4O15217 222 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 SPRY1O43609 319 aaPredicted RBP13.43□□□□□ -0.26
GPC1-206ENST00000455111 IGHV4-38-2P0DP08 117 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 RAC2P15153 192 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 IFNA8P32881 189 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 ZMAT1Q5H9K5 638 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 GLYATQ6IB77 296 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 BPIFB2Q8N4F0 458 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 OR8G5Q8NG78 346 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 ST7LQ8TDW4 575 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 POP5Q969H6 163 aaKnown RBP13.43□□□□□ -0.26
GPC1-206ENST00000455111 FAM162AQ96A26 154 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 SLC30A2Q9BRI3 323 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 FN3KQ9H479 309 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 TMEM5Q9Y2B1 443 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 PCDHGB1Q9Y5G3 927 aa13.43□□□□□ -0.26
GPC1-206ENST00000455111 IGHV3OR16-10A0A075B7F0 116 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 UNC119BA6NIH7 251 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 F5H5P2 479 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 KCNAB3O43448 404 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 FCN3O75636 299 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 HLA-DPB1P04440 258 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 HKR1P10072 659 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 RHCEP18577 417 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 TNFRSF1AP19438 455 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 TUBG1P23258 451 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 MDH1P40925 334 aaKnown RBP13.42□□□□□ -0.26
GPC1-206ENST00000455111 GUCA1AP43080 201 aaPredicted RBP13.42□□□□□ -0.26
GPC1-206ENST00000455111 COX10Q12887 443 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 SCGB2A2Q13296 93 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 MAB21L1Q13394 359 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 FGD3Q5JSP0 725 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 GPR139Q6DWJ6 353 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 SLC18B1Q6NT16 456 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 ARL9Q6T311 187 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 DPY19L2P2Q6ZN68 376 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.42□□□□□ -0.26
GPC1-206ENST00000455111 LINC00346Q8IVM7 164 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 SPICQ8N5J4 248 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 TEX29Q8N6K0 151 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 C3orf56Q8N813 242 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 SLC26A10Q8NG04 563 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 OR10S1Q8NGN2 331 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 NMNAT3Q96T66 252 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 KCTD14Q9BQ13 255 aaPredicted RBP13.42□□□□□ -0.26
GPC1-206ENST00000455111 EFCAB1Q9HAE3 211 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 TUBG2Q9NRH3 451 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 MRPL22Q9NWU5 206 aaKnown RBP13.42□□□□□ -0.26
GPC1-206ENST00000455111 ATPIF1Q9UII2 106 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms