RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 ZNF107Q9UII5 783 aaPredicted RBP13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 PDCD11Q14690 1871 aaKnown RBP13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 ZNF354AO60765 605 aaPredicted RBP13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 GLSO94925 669 aaPredicted RBP13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 HCCSP53701 268 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 FBXW12Q6X9E4 464 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 SYT9Q86SS6 491 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 OR4D9Q8NGE8 314 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 GLYATL2Q8WU03 294 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 MARVELD1Q9BSK0 173 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 IGHV3-20A0A0C4DH32 117 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 SERPINE3A8MV23 424 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 WNT11O96014 354 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 HOXB5P09067 269 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 FOXF1Q12946 379 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 C17orf47Q8NEP4 570 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 OR4N2Q8NGD1 307 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 NMNAT2Q9BZQ4 307 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 OR11A1Q9GZK7 315 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 VN1R1Q9GZP7 353 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 TCEAL2Q9H3H9 227 aaPredicted RBP13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 ASH2LQ9UBL3 628 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 MYO9BQ13459 2157 aa13.38□□□□□ -0.27
AP000550.1-201ENST00000420508 DHHO43323 396 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 EIF3IQ13347 325 aaKnown RBP13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 RHBDD2Q6NTF9 364 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 TMEM200AQ86VY9 491 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 LFNGQ8NES3 379 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 FYTTD1Q96QD9 318 aaKnown RBP13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 PLK3Q9H4B4 646 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 PLEKHB1Q9UF11 243 aaPredicted RBP13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 ANK1P16157 1881 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 M0QYG6 137 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 MBTPS2O43462 519 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 AQP8O94778 261 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 IGF2P01344 180 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 IFNA17P01571 189 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 LIMS1P48059 325 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 TBC1D28Q2M2D7 210 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 MEX3BQ6ZN04 569 aaKnown RBP13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 ACOT7LQ6ZUV0 252 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 ZDHHC22Q8N966 263 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 OR51E1Q8TCB6 317 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 RBPMSQ93062 196 aaKnown RBP13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 KTI12Q96EK9 354 aaPredicted RBP13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 KIRREL1Q96J84 757 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 DERL3Q96Q80 235 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 GDF2Q9UK05 429 aaPredicted RBP13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 ANKRD61A6NGH8 418 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 MPPED2Q15777 294 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 C10orf111Q8N326 155 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 OR4C3Q8NH37 302 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 TSSK2Q96PF2 358 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 PDGFAP04085 211 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 NGFRP08138 427 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 GSK3AP49840 483 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 FAM185AQ8N0U4 392 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 OR10R2Q8NGX6 335 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 OR1L3Q8NH93 324 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 CHST6Q9GZX3 395 aa13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 ZNF275Q9NSD4 429 aaPredicted RBP13.37□□□□□ -0.27
AP000550.1-201ENST00000420508 PLSCR5A0PG75 271 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 ZNF770Q6IQ21 691 aaPredicted RBP13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 LANCL3Q6ZV70 420 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 SLC38A9Q8NBW4 561 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 OR13C5Q8NGS8 318 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 OR10K1Q8NGX5 313 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 TAAR8Q969N4 342 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 SPSB1Q96BD6 273 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 RPP25Q9BUL9 199 aaKnown RBP13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 COPS3Q9UNS2 423 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 MSTNO14793 375 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 TPOP07202 933 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 HBG1P69891 147 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 HBG2P69892 147 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 SLC25A35Q3KQZ1 300 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 GLDNQ6ZMI3 551 aaPredicted RBP13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 Q6ZS52 159 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 ATG4DQ86TL0 474 aaPredicted RBP13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 SPICQ8N5J4 248 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 OR2AK2Q8NG84 335 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 SCARF2Q96GP6 870 aaPredicted RBP13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 GPR84Q9NQS5 396 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 DNAJB11Q9UBS4 358 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 DSPPQ9NZW4 1301 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 RAB19A4D1S5 217 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 OR2J2O76002 312 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 NDUFB6O95139 128 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 ANXA7P20073 488 aaKnown RBP13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 IL2RGP31785 369 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 IKZF1Q13422 519 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 PCK2Q16822 640 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 D2HGDHQ8N465 521 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 SEH1LQ96EE3 360 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 RAB33BQ9H082 229 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 FBXL2Q9UKC9 423 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 CASP8AP2Q9UKL3 1982 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 IGHV5-51A0A0C4DH38 117 aa13.36□□□□□ -0.27
AP000550.1-201ENST00000420508 ATF1P18846 271 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms