RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TM4SF19Q96DZ7 209 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 COQ2Q96H96 371 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 CXorf58Q96LI9 332 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 LRRC61Q9BV99 259 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 SLC38A1Q9H2H9 487 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 CRIM1Q9NZV1 1036 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 PURGQ9UJV8 347 aaKnown RBP8.42□□□□□ -1.06
SNHG3-201ENST00000413987 PIGLQ9Y2B2 252 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 OR10H1Q9Y4A9 318 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 URGCP-MRPS24S4R325 110 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 SNRNP200O75643 2136 aaKnown RBP8.42□□□□□ -1.06
SNHG3-201ENST00000413987 UBL3O95164 117 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 H2AFB1P0C5Y9 115 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 SLC35E2P0CK97 266 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 LIMS3P0CW19 117 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 LIMS4P0CW20 117 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 GIMD1P0DJR0 217 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 B4GALT1P15291 398 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 CELP19835 753 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 PRDX2P32119 198 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 CD96P40200 585 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 MMP15P51511 669 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 AKR1D1P51857 326 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 LIM2P55344 173 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 MLF1P58340 268 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 RPL15P61313 204 aaKnown RBP8.42□□□□□ -1.06
SNHG3-201ENST00000413987 ARF6P62330 175 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 HBA1P69905 142 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 PAX5Q02548 391 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 KRT33BQ14525 404 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 TEX30Q5JUR7 227 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 PDSS1Q5T2R2 415 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 DCAF12L2Q5VW00 463 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 PARGQ86W56 976 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 OR4A16Q8NH70 328 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 WDR20Q8TBZ3 569 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 ST8SIA2Q92186 375 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 FANCD2OSQ96PS1 177 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 DPH7Q9BTV6 452 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 IFT27Q9BW83 186 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 REEP4Q9H6H4 257 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 MTHFD2LQ9H903 347 aaPredicted RBP8.42□□□□□ -1.06
SNHG3-201ENST00000413987 LPAR2Q9HBW0 351 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 LANCL2Q9NS86 450 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 RPS6KB2Q9UBS0 482 aa8.42□□□□□ -1.06
SNHG3-201ENST00000413987 A0A1B0GVT2 93 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 B4DGG1 531 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 C9orf172C9J069 976 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 C5orf58C9J3I9 102 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 NPIPA7E9PJI5 369 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 G3V3Q6 166 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 ZNF593O00488 134 aaPredicted RBP8.41□□□□□ -1.06
SNHG3-201ENST00000413987 TFP02787 698 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 STATHP02808 62 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 ALDOBP05062 364 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 EIF4EP06730 217 aaKnown RBP8.41□□□□□ -1.06
SNHG3-201ENST00000413987 HOXC4P09017 264 aaPredicted RBP8.41□□□□□ -1.06
SNHG3-201ENST00000413987 NPIPA8P0DM63 369 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 TFPIP10646 304 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 PPP3CBP16298 524 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 P2RY4P51582 365 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 PSMD4P55036 377 aaKnown RBP8.41□□□□□ -1.06
SNHG3-201ENST00000413987 ZP1P60852 638 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 GRM7Q14831 915 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 SLC17A1Q14916 467 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 HIST2H2AA3Q6FI13 130 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 PGAP1Q75T13 922 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 WDR53Q7Z5U6 358 aaPredicted RBP8.41□□□□□ -1.06
SNHG3-201ENST00000413987 TMPRSS11BQ86T26 416 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 C1orf87Q8N0U7 546 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 STPG2Q8N412 459 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 SAMD12Q8N8I0 201 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 ZNF740Q8NDX6 193 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 MBD3L2Q8NHZ7 208 aaPredicted RBP8.41□□□□□ -1.06
SNHG3-201ENST00000413987 COQ8AQ8NI60 647 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 APOBEC4Q8WW27 367 aaKnown RBP8.41□□□□□ -1.06
SNHG3-201ENST00000413987 DDOQ99489 341 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 C1QTNF6Q9BXI9 259 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 ZFAND3Q9H8U3 227 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 SPHK1Q9NYA1 384 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 MED11Q9P086 117 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 TAAR2Q9P1P5 351 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 MLXQ9UH92 298 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 TAC3Q9UHF0 121 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 COA3Q9Y2R0 106 aaPredicted RBP8.41□□□□□ -1.06
SNHG3-201ENST00000413987 PLXND1Q9Y4D7 1925 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 SHISA3A0PJX4 238 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 GXYLT2A0PJZ3 443 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 NAP1L6A6NFF2 107 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 PATE3B3GLJ2 98 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 MCRIP1C9JLW8 97 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 LINC01387J3KSC0 135 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 FZD7O75084 574 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 TOXO94900 526 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 C6orf47O95873 294 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 TNFP01375 233 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 APOC3P02656 99 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 ANKRD34CP0C6C1 535 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 RD3LP0DJH9 198 aa8.41□□□□□ -1.06
SNHG3-201ENST00000413987 CD8BP10966 210 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms