RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 GLI4P10075 376 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 TGFBR1P36897 503 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 PSMA6P60900 246 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 RAB35Q15286 201 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 ZNF829Q3KNS6 432 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 WDR38Q5JTN6 314 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 ELFN2Q5R3F8 820 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 SLC16A14Q7RTX9 510 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 BTLAQ7Z6A9 289 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 NAXEQ8NCW5 288 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 OR1K1Q8NGR3 316 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 ABHD4Q8TB40 342 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 NDNFQ8TB73 568 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 RGP1Q92546 391 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 ATF6BQ99941 703 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 HDHD2Q9H0R4 259 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 RNF167Q9H6Y7 350 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 EXOSC4Q9NPD3 245 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 G6PC2Q9NQR9 355 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 FAM206AQ9NX38 181 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 ZNF281Q9Y2X9 895 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 TIMM10BQ9Y5J6 103 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 OR6C6A6NF89 314 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 TTLL8A6PVC2 850 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 SYNGR3O43761 229 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 CD8BP10966 210 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 ZNF32P17041 273 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 COX5AP20674 150 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 PER3P56645 1201 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 RBPJQ06330 500 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 ECH1Q13011 328 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 LY6DQ14210 128 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 RSPO1Q2MKA7 263 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 KRTAP27-1Q3LI81 207 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 YIF1BQ5BJH7 314 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 ZNF544Q6NX49 715 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 ANKRD16Q6P6B7 361 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 UNQ9370/PRO34162Q6UXP9 181 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 USP43Q70EL4 1123 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 KBTBD8Q8NFY9 601 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 OR5AK2Q8NH90 309 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 FGFBP3Q8TAT2 258 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 DYNC2LI1Q8TCX1 351 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 BCL2L2Q92843 193 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 PCNX1Q96RV3 2341 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 HDHD5Q9BXW7 423 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 DCSTAMPQ9H295 470 aa17.05■□□□□ 0.32
PDLIM2-205ENST00000397761 ARPC4-TTLL3A0A0A6YYG9 625 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 TMEM269A0A1B0GVZ9 245 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 SGCEO43556 437 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 SERPINA3P01011 423 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 CRYGSP22914 178 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 TUBA1BP68363 451 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 C22orf42Q6IC83 251 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 TUBA1AQ71U36 451 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 DPPA2Q7Z7J5 298 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 GABRG1Q8N1C3 465 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 DACH2Q96NX9 599 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 KCNJ15Q99712 375 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 OR2H1Q9GZK4 316 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 KCNN2Q9H2S1 579 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 ATPIF1Q9UII2 106 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 SLC5A6Q9Y289 635 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 GSTK1Q9Y2Q3 226 aa17.04■□□□□ 0.32
PDLIM2-205ENST00000397761 LOC110117498-PIK3R3F6TDL0 507 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 GATBO75879 557 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 ZNF182P17025 639 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 IGHV1-2P23083 117 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 PSG4Q00888 419 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 INSL4Q14641 139 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 SLC36A2Q495M3 483 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 C9orf135Q5VTT2 229 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 ST6GALNAC3Q8NDV1 305 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 PHYHIPQ92561 330 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 KCTD7Q96MP8 289 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 DCUN1D5Q9BTE7 237 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 MED18Q9BUE0 208 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 SFXN3Q9BWM7 321 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 WNT5BQ9H1J7 359 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 MOB1AQ9H8S9 216 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 PLEK2Q9NYT0 353 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 NUFIP1Q9UHK0 495 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 OR52A1Q9UKL2 312 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 PROCRQ9UNN8 238 aa17.03■□□□□ 0.32
PDLIM2-205ENST00000397761 TRBV5-5A0A0J9YX44 114 aa17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 ACOD1A6NK06 481 aa17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 DVL2O14641 736 aa17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 ISG15P05161 165 aa17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 HSD11B1P28845 292 aa17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 TGFBR3Q03167 851 aa17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 TAF13Q15543 124 aa17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 ACSM3Q53FZ2 586 aa17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 PAMR1Q6UXH9 720 aa17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 PRSS45Q7RTY3 260 aa17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 ZNF433Q8N7K0 673 aaPredicted RBP17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 C1orf162Q8NEQ5 155 aaPredicted RBP17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 OR13C5Q8NGS8 318 aa17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 OR1F12Q8NHA8 337 aa17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 COMMD4Q9H0A8 199 aa17.02■□□□□ 0.32
PDLIM2-205ENST00000397761 TINAGQ9UJW2 476 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms