RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SNTG1Q9NSN8 517 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 CENPMQ9NSP4 180 aa11.14□□□□□ -0.63
TRIM39-204ENST00000396548 TMEM269A0A1B0GVZ9 245 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF587BE7ETH6 402 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 TNFSF13O75888 250 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 CGAP01215 116 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 TTRP02766 147 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 PEX19P40855 299 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 GRB2P62993 217 aaKnown RBP11.13□□□□□ -0.63
TRIM39-204ENST00000396548 Q499Y3 187 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 ELFN2Q5R3F8 820 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 KLHL24Q6TFL4 600 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 PAMR1Q6UXH9 720 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 ELMOD2Q8IZ81 293 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 GFI1Q99684 422 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF835Q9Y2P0 537 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF503-AS2A6NEH8 195 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 E9PLN8 166 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 CALRP27797 417 aaKnown RBP11.13□□□□□ -0.63
TRIM39-204ENST00000396548 GUCA1AP43080 201 aaPredicted RBP11.13□□□□□ -0.63
TRIM39-204ENST00000396548 RORCP51449 518 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 FAM57AQ8TBR7 257 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 KCNJ15Q99712 375 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 WNT5BQ9H1J7 359 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 C12orf49Q9H741 205 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 AKIP1Q9NQ31 210 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 SLC17A5Q9NRA2 495 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF319Q9P2F9 582 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 POLR1DQ9Y2S0 133 aa11.13□□□□□ -0.63
TRIM39-204ENST00000396548 CACNA1GO43497 2377 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 IQCMA0A1B0GVH7 501 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 WDR1O75083 606 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 PSG4Q00888 419 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 MXD1Q05195 221 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 FOXF2Q12947 444 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 RAB35Q15286 201 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 MOGQ16653 247 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF829Q3KNS6 432 aaPredicted RBP11.12□□□□□ -0.63
TRIM39-204ENST00000396548 P4HA3Q7Z4N8 544 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 TPRA1Q86W33 373 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 ATF6BQ99941 703 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 OR2H1Q9GZK4 316 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 PBOV1Q9GZY1 135 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 NOX4Q9NPH5 578 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 NUFIP1Q9UHK0 495 aaKnown RBP11.12□□□□□ -0.63
TRIM39-204ENST00000396548 SLC5A6Q9Y289 635 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
TRIM39-204ENST00000396548 CAV3P56539 151 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 FAPQ12884 760 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF585AQ6P3V2 769 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF813Q6ZN06 617 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 Q6ZSR3 168 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.12□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF100Q8IYN0 542 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 CISD2Q8N5K1 135 aaKnown RBP11.12□□□□□ -0.63
TRIM39-204ENST00000396548 MCFD2Q8NI22 146 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 ZFAND2BQ8WV99 257 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 SNRNP40Q96DI7 357 aaKnown RBP11.12□□□□□ -0.63
TRIM39-204ENST00000396548 COMMD4Q9H0A8 199 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 MOB1AQ9H8S9 216 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 PLSCR4Q9NRQ2 329 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 A0A1B0GTI1 187 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 ACOD1A6NK06 481 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 LOC110117498-PIK3R3F6TDL0 507 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 NCR1O76036 304 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 CNOT4O95628 575 aaKnown RBP11.12□□□□□ -0.63
TRIM39-204ENST00000396548 GABRA1P14867 456 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF32P17041 273 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 PTGER4P35408 488 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 THBS2P35442 1172 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 OR2A2Q6IF42 318 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 OR6K3Q8NGY3 331 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 ASB5Q8WWX0 329 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 TIMM10BQ9Y5J6 103 aa11.12□□□□□ -0.63
TRIM39-204ENST00000396548 C5orf63A6NC05 138 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 TMEM8BA6NDV4 472 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 PATE4P0C8F1 98 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 SRMP19623 302 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 CCL1P22362 96 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 MPGP29372 298 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 CX3CR1P49238 355 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF121P58317 390 aaPredicted RBP11.11□□□□□ -0.63
TRIM39-204ENST00000396548 HGFACQ04756 655 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 HNRNPA0Q13151 305 aaKnown RBP11.11□□□□□ -0.63
TRIM39-204ENST00000396548 PRR30Q53SZ7 412 aaPredicted RBP11.11□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF774Q6NX45 483 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 LRRTM1Q86UE6 522 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 NAA40Q86UY6 237 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 GCNT2Q8N0V5 402 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 MFSD4AQ8N468 514 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF676Q8N7Q3 588 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 OR1K1Q8NGR3 316 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 GPR148Q8TDV2 347 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 BCL2L2Q92843 193 aaPredicted RBP11.11□□□□□ -0.63
TRIM39-204ENST00000396548 SLC30A2Q9BRI3 323 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 UPB1Q9UBR1 384 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 KRT33AO76009 404 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 RAF1P04049 648 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 ACSM4P0C7M7 580 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 SOX6P35712 828 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms