RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 GPX6P59796 221 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 MXD1Q05195 221 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 PDK3Q15120 406 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 NADK2Q4G0N4 442 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 KLHL12Q53G59 568 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 PDZK1Q5T2W1 519 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 DEGS2Q6QHC5 323 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 TMEM150AQ86TG1 271 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 MDP1Q86V88 176 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 NKAIN4Q8IVV8 208 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 CHST4Q8NCG5 386 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 LY6G5BQ8NDX9 201 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 SLC26A10Q8NG04 563 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 OR2Z1Q8NG97 314 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 LRRC29Q8WV35 223 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 YIPF5Q969M3 257 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 TMEM230Q96A57 120 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 DUS3LQ96G46 650 aaKnown RBP0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 C12orf42Q96LP6 360 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 MARVELD1Q9BSK0 173 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 GGTLC1Q9BX51 225 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 ANKRD19PQ9H560 264 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 METTL7AQ9H8H3 244 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 MED4Q9NPJ6 270 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 TMEM106BQ9NUM4 274 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 TAS2R3Q9NYW6 316 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 ADAM28Q9UKQ2 775 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 VANGL2Q9ULK5 521 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 TSSC4Q9Y5U2 329 aaPredicted RBP0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 NACADO15069 1562 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 MUC16Q8WXI7 14507 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 PALLDQ8WX93 1383 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 TENM1Q9UKZ4 2725 aa0.43□□□□□ -2.34
SNORD28B-201ENST00000390993 TRAV26-1A0A087WT03 109 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 GLYATL1P3A0A0U1RQE8 302 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 A0A1B0GVL5 298 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 CLRN2A0PK11 232 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 FAM47DPA6NHR8 397 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 LYRM9A8MSI8 78 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 SYCE1LA8MT33 242 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 KRBOX1C9JBD0 128 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 NDUFC2-KCTD14E9PQ53 114 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 HAS3O00219 553 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 TAAR5O14804 337 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 MAGEB3O15480 346 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 AQP9O43315 295 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 CLPXO76031 633 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 GLSO94925 669 aaPredicted RBP0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 TROVE2P10155 538 aaKnown RBP eCLIP0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 NTF3P20783 257 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 PAX7P23759 505 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 MPIP34949 423 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 PCK1P35558 622 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 FUSP35637 526 aaKnown RBP eCLIP0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 CSNK1EP49674 416 aaKnown RBP0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 CDH6P55285 790 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 RPL23P62829 140 aaKnown RBP0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 KCNJ2P63252 427 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 HTD2P86397 168 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 CUL2Q13617 745 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 DGCR6Q14129 220 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 ZNF141Q15928 474 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 ZNF77Q15935 545 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 TMEM69Q5SWH9 247 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 SPECC1LQ69YQ0 1117 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 ANKRD26P1Q6NSI1 321 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 H2BFWTQ7Z2G1 175 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 DAZ4Q86SG3 579 aaKnown RBP0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 PSTKQ8IV42 348 aaKnown RBP0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 UBAC2Q8NBM4 344 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 OR11H7Q8NGC8 314 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 OR4M1Q8NGD0 313 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 RAB3IL1Q8TBN0 382 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 SLC2A14Q8TDB8 520 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 SCFD1Q8WVM8 642 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 N4BP2L2Q92802 583 aaPredicted RBP0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 TRIM44Q96DX7 344 aaPredicted RBP0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 COQ2Q96H96 371 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 PKNOX2Q96KN3 472 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 TCEANC2Q96MN5 208 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 ZFP3Q96NJ6 502 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 OR5B12Q96R08 314 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 FMO2Q99518 471 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 ZNF649Q9BS31 505 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 TRIM62Q9BVG3 475 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 RSPH9Q9H1X1 276 aaPredicted RBP0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 TRIM45Q9H8W5 580 aaPredicted RBP0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 TMEM27Q9HBJ8 222 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 MYOZ1Q9NP98 299 aaPredicted RBP0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 NT5MQ9NPB1 228 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 DAZ1Q9NQZ3 744 aaKnown RBP0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 INIPQ9NRY2 104 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 PDP1Q9P0J1 537 aaPredicted RBP0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 NUP50Q9UKX7 468 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 NPTNQ9Y639 398 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 ZSWIM8A7E2V4 1837 aa0.42□□□□□ -2.34
SNORD28B-201ENST00000390993 THADAQ6YHU6 1953 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 IGLV10-54A0A075B6I4 117 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 C15orf38-AP3S2A0A0A6YYH1 394 aa0.41□□□□□ -2.34
SNORD28B-201ENST00000390993 IGHV3-72A0A0B4J1Y9 119 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms