RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 DNAJC27Q9NZQ0 273 aa13.92□□□□□ -0.18
SNRPB-201ENST00000381342 FZR1Q9UM11 496 aa13.92□□□□□ -0.18
SNRPB-201ENST00000381342 GMPPBQ9Y5P6 360 aa13.92□□□□□ -0.18
SNRPB-201ENST00000381342 ITPR3Q14573 2671 aa13.92□□□□□ -0.18
SNRPB-201ENST00000381342 ABHD16AO95870 558 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 LCKP06239 509 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 PAX1P15863 534 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 PCSK6P29122 969 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 CDKN1AP38936 164 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 UCP2P55851 309 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 RPS23P62266 143 aaKnown RBP13.91□□□□□ -0.18
SNRPB-201ENST00000381342 SLC34A1Q06495 639 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 TEX30Q5JUR7 227 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 SPATA46Q5T0L3 261 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 SPATC1Q76KD6 591 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 MEPCEQ7L2J0 689 aaKnown RBP13.91□□□□□ -0.18
SNRPB-201ENST00000381342 GID4Q8IVV7 300 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 PACRGLQ8N7B6 248 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 OR8J1Q8NGP2 316 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 ABHD4Q8TB40 342 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 ST7LQ8TDW4 575 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 UBE2FQ969M7 185 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 RDH12Q96NR8 316 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 TEAD3Q99594 435 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 DLL4Q9NR61 685 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 CBLN4Q9NTU7 201 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 FAM118AQ9NWS6 357 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 GRIP1Q9Y3R0 1128 aa13.91□□□□□ -0.18
SNRPB-201ENST00000381342 ARID1AO14497 2285 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 H7C1Q1 480 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 ATP6V1G2O95670 118 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 NGFP01138 241 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 BMP4P12644 408 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 GLRXP35754 106 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 SERPINF1P36955 418 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 RGS7BPQ6MZT1 257 aaPredicted RBP13.9□□□□□ -0.18
SNRPB-201ENST00000381342 KRTAP1-3Q8IUG1 177 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 OR1J1Q8NGS3 322 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 SLAMF6Q96DU3 332 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 C4orf45Q96LM5 186 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 ZNF582Q96NG8 517 aaPredicted RBP13.9□□□□□ -0.18
SNRPB-201ENST00000381342 AMELYQ99218 206 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 SYT3Q9BQG1 590 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 ABHD6Q9BV23 337 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 CACNG6Q9BXT2 260 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 MRPL37Q9BZE1 423 aaKnown RBP13.9□□□□□ -0.18
SNRPB-201ENST00000381342 BCL2L14Q9BZR8 327 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 RASSF4Q9H2L5 321 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 BARX1Q9HBU1 254 aaPredicted RBP13.9□□□□□ -0.18
SNRPB-201ENST00000381342 C8orf4Q9NR00 106 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 H2AFY2Q9P0M6 372 aaPredicted RBP13.9□□□□□ -0.18
SNRPB-201ENST00000381342 EIF3KQ9UBQ5 218 aaKnown RBP13.9□□□□□ -0.18
SNRPB-201ENST00000381342 KLHDC2Q9Y2U9 406 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 CMAHPQ9Y471 501 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 ARFGEF3Q5TH69 2177 aa13.9□□□□□ -0.18
SNRPB-201ENST00000381342 LOC100130705A0A1B0GUX0 176 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 SLC22A31A6NKX4 558 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 ZNF878C9JN71 531 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 SMAD7O15105 426 aaKnown RBP13.89□□□□□ -0.19
SNRPB-201ENST00000381342 ICMTO60725 284 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 RAD52P43351 418 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 GGTLC2Q14390 218 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 RSPO1Q2MKA7 263 aaPredicted RBP13.89□□□□□ -0.19
SNRPB-201ENST00000381342 MST1LQ2TV78 715 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 KRTAP27-1Q3LI81 207 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 CLEC9AQ6UXN8 241 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 SHFQ7M4L6 423 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 SLC16A9Q7RTY1 509 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 LRP11Q86VZ4 500 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 OTOSQ8NHW6 89 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 NRG4Q8WWG1 115 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 MRPL24Q96A35 216 aaKnown RBP13.89□□□□□ -0.19
SNRPB-201ENST00000381342 CNN2Q99439 309 aaKnown RBP13.89□□□□□ -0.19
SNRPB-201ENST00000381342 COPS4Q9BT78 406 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 POFUT1Q9H488 388 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 PLK3Q9H4B4 646 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 GSX1Q9H4S2 264 aaPredicted RBP13.89□□□□□ -0.19
SNRPB-201ENST00000381342 CENPMQ9NSP4 180 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 DDX28Q9NUL7 540 aaKnown RBP13.89□□□□□ -0.19
SNRPB-201ENST00000381342 MYEF2Q9P2K5 600 aaKnown RBP13.89□□□□□ -0.19
SNRPB-201ENST00000381342 AASSQ9UDR5 926 aa13.89□□□□□ -0.19
SNRPB-201ENST00000381342 F5H5K5 113 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 OVOL3O00110 214 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 APOL3O95236 402 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 ACSM4P0C7M7 580 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 HTR1FP30939 366 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 HCCSP53701 268 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 PPP1CBP62140 327 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 SNRPD2P62316 118 aaKnown RBP13.88□□□□□ -0.19
SNRPB-201ENST00000381342 ECH1Q13011 328 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 EFNB3Q15768 340 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 SWI5Q1ZZU3 235 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 ARL9Q6T311 187 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 ENTHD1Q8IYW4 607 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 RFLNBQ8N5W9 214 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 ZNF555Q8NEP9 628 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 SLC25A40Q8TBP6 338 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 CYGBQ8WWM9 190 aa13.88□□□□□ -0.19
SNRPB-201ENST00000381342 DCLRE1CQ96SD1 692 aaKnown RBP13.88□□□□□ -0.19
SNRPB-201ENST00000381342 TTTY10Q9BZA0 68 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms