RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 OR5T2Q8NGG2 359 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 CD99L2Q8TCZ2 262 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 GPX8Q8TED1 209 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 LCN9Q8WX39 176 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 TSACCQ96A04 125 aaPredicted RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 HIST1H2BAQ96A08 127 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 SLC25A36Q96CQ1 311 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 PIK3IP1Q96FE7 263 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 MARS2Q96GW9 593 aaKnown RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 COX14Q96I36 57 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 SLC41A2Q96JW4 573 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 KXD1Q9BQD3 176 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 NRIP2Q9BQI9 281 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 NICN1Q9BSH3 213 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 FGF22Q9HCT0 170 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 SERTAD3Q9UJW9 196 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 ADAM29Q9UKF5 820 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 DAPP1Q9UN19 280 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 MRPS33Q9Y291 106 aaKnown RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 C9orf170A2RU37 121 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 PMS2P1A4D2B8 440 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 SDCBPO00560 298 aaPredicted RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 NME2P1O60361 137 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 AGR2O95994 175 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 SPARCP09486 303 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 OR8U8P0C7N1 319 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 TMEM11P17152 192 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 RAB6AP20340 208 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 RPS4Y1P22090 263 aaKnown RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 FAUP35544 74 aaKnown RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 CEBPGP53567 150 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 S100A10P60903 97 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 RIPPLY1Q0D2K3 151 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 PMPCAQ10713 525 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 RAB11BQ15907 218 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 EIPR1Q53HC9 387 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 GFI1BQ5VTD9 330 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 LCN10Q6JVE6 187 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 ENPP7Q6UWV6 458 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 NPSR1Q6W5P4 371 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 USP53Q70EK8 1073 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 GALNTL5Q7Z4T8 443 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 TRAPPC6BQ86SZ2 158 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 MISPQ8IVT2 679 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 NRSN1Q8IZ57 195 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 RNF113BQ8IZP6 322 aaKnown RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF321PQ8N8H1 164 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 POMGNT2Q8NAT1 580 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 INO80EQ8NBZ0 244 aaPredicted RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 OR9A4Q8NGU2 314 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 GPR148Q8TDV2 347 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 OR10C1Q96KK4 312 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 TSPAN32Q96QS1 320 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 FOXQ1Q9C009 403 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 NRSN2Q9GZP1 204 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 RAB33BQ9H082 229 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 SYNDIG1Q9H7V2 258 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 PTGES2Q9H7Z7 377 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 CHMP1AQ9HD42 196 aaPredicted RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 RCC2Q9P258 522 aaKnown RBP4.86□□□□□ -1.63
ATG4A-204ENST00000372246 SLC27A6Q9Y2P4 619 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 SPACA6W5XKT8 324 aa4.86□□□□□ -1.63
ATG4A-204ENST00000372246 ZFHX4Q86UP3 3567 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 A0A0D9SG52 128 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 TRBV5-5A0A0J9YX44 114 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 LOC390937A0A1W2PQ73 354 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 PQLC2LA1A4F0 135 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 METTL21EPA6NDL7 271 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 C5orf52A6NGY3 159 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF727A8MUV8 499 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 SLC33A1O00400 549 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 VEGFDO43915 354 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 MED6O75586 246 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 GLCEO94923 617 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 CYB5AP00167 134 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 CSTAP01040 98 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 CD74P04233 296 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 CEACAM5P06731 702 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 HOXB5P09067 269 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 JMJD7P0C870 316 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ADH5P11766 374 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 IL11P20809 199 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 MAOAP21397 527 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ZBTB25P24278 435 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 CST5P28325 142 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 TRA2BP62995 288 aaKnown RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ZP2Q05996 745 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 MGAT2Q10469 447 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 SREBF2Q12772 1141 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ECH1Q13011 328 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 CCINQ13939 588 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF77Q15935 545 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 MICBQ29980 383 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 PRICKLE4Q2TBC4 344 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 TMEM35AQ53FP2 167 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 PAPD4Q6PIY7 484 aaKnown RBP4.85□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF813Q6ZN06 617 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 DNM1P46Q6ZS02 220 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 FAM122BQ7Z309 247 aa4.85□□□□□ -1.63
ATG4A-204ENST00000372246 FAM220AQ7Z4H9 259 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms