RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 Q6ZNX1 250 aa16.51■□□□□ 0.23
EXOSC3-201ENST00000327304 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.51■□□□□ 0.23
EXOSC3-201ENST00000327304 NR2C2APQ86WQ0 139 aa16.51■□□□□ 0.23
EXOSC3-201ENST00000327304 OR10H5Q8NGA6 315 aa16.51■□□□□ 0.23
EXOSC3-201ENST00000327304 MCHR2Q969V1 340 aa16.51■□□□□ 0.23
EXOSC3-201ENST00000327304 OR14A2Q96R54 314 aa16.51■□□□□ 0.23
EXOSC3-201ENST00000327304 C12orf49Q9H741 205 aa16.51■□□□□ 0.23
EXOSC3-201ENST00000327304 PARPBPQ9NWS1 579 aa16.51■□□□□ 0.23
EXOSC3-201ENST00000327304 NBASA2RRP1 2371 aa16.5■□□□□ 0.23
EXOSC3-201ENST00000327304 IGHV3-9P01782 118 aa16.5■□□□□ 0.23
EXOSC3-201ENST00000327304 QDPRP09417 244 aa16.5■□□□□ 0.23
EXOSC3-201ENST00000327304 GLI4P10075 376 aa16.5■□□□□ 0.23
EXOSC3-201ENST00000327304 RAB3BP20337 219 aa16.5■□□□□ 0.23
EXOSC3-201ENST00000327304 FOXF2Q12947 444 aa16.5■□□□□ 0.23
EXOSC3-201ENST00000327304 HSD17B12Q53GQ0 312 aa16.5■□□□□ 0.23
EXOSC3-201ENST00000327304 ST7LQ8TDW4 575 aa16.5■□□□□ 0.23
EXOSC3-201ENST00000327304 C11orf40Q8WZ69 217 aa16.5■□□□□ 0.23
EXOSC3-201ENST00000327304 RGP1Q92546 391 aaPredicted RBP16.5■□□□□ 0.23
EXOSC3-201ENST00000327304 THRSPQ92748 146 aa16.5■□□□□ 0.23
EXOSC3-201ENST00000327304 C4orf45Q96LM5 186 aa16.5■□□□□ 0.23
EXOSC3-201ENST00000327304 ZCCHC4Q9H5U6 513 aa16.5■□□□□ 0.23
EXOSC3-201ENST00000327304 V9GYH0 126 aa16.5■□□□□ 0.23
EXOSC3-201ENST00000327304 TRBV5-5A0A0J9YX44 114 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 KIR2DL2P43627 348 aaPredicted RBP16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 ZNF133P52736 654 aaPredicted RBP16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 Q499Y3 187 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 TSPO2Q5TGU0 170 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 OTPQ5XKR4 325 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 SFXN4Q6P4A7 337 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 FAM214BQ7L5A3 538 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 LINGO2Q7L985 606 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 CNEP1R1Q8N9A8 125 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 MINDY2Q8NBR6 621 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 NAXEQ8NCW5 288 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 APH1AQ96BI3 265 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 ALKBH3Q96Q83 286 aaPredicted RBP16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 SLCO5A1Q9H2Y9 848 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 COMMD3Q9UBI1 195 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 ADAM30Q9UKF2 790 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 FREM1Q5H8C1 2179 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 SMG1Q96Q15 3661 aaKnown RBP16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 POLEQ07864 2286 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 A0A0G2JK05 382 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 ANKRD61A6NGH8 418 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 PER3P56645 1201 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 KCNMB1Q16558 191 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 DCXRQ7Z4W1 244 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 ZNF100Q8IYN0 542 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 PRSS35Q8N3Z0 413 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 DERL3Q96Q80 235 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 ULBP2Q9BZM5 246 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 NOX4Q9NPH5 578 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 SLC7A10Q9NS82 523 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 CYB5R1Q9UHQ9 305 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 EMC9Q9Y3B6 208 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 LRP12Q9Y561 859 aa16.49■□□□□ 0.23
EXOSC3-201ENST00000327304 KMT2BQ9UMN6 2715 aaPredicted RBP16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 TBX1O43435 398 aa16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 TMEM127O75204 238 aa16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 RAF1P04049 648 aa16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 TIMP3P35625 211 aa16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 WDR38Q5JTN6 314 aa16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 IDNKQ5T6J7 187 aa16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 VWA1Q6PCB0 445 aa16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 METAP1DQ6UB28 335 aaPredicted RBP16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 DCDC5Q6ZRR9 648 aa16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 NCCRP1Q6ZVX7 275 aaPredicted RBP16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 SNX29P2Q8IUI4 249 aa16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 LYSMD2Q8IV50 215 aa16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 GPR137CQ8N3F9 429 aa16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 ZNF676Q8N7Q3 588 aa16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 ZNF837Q96EG3 531 aaPredicted RBP16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 DIRAS2Q96HU8 199 aa16.48■□□□□ 0.23
EXOSC3-201ENST00000327304 TRGV8A0A0C4DH27 118 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 NOTOA8MTQ0 251 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 PDCD5O14737 125 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 PIN1P1O15428 100 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 TNFSF13O75888 250 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 TMIGD3P0DMS9 266 aaPredicted RBP16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 SRMP19623 302 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 CEACAM8P31997 349 aaPredicted RBP16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 THBS2P35442 1172 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 KIR3DL2P43630 455 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 OR3A2P47893 321 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 MRPL49Q13405 166 aaKnown RBP16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 C10orf128Q5T292 105 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 RHOUQ7L0Q8 258 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 CENPSQ8N2Z9 138 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 GPR148Q8TDV2 347 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 RNF133Q8WVZ7 376 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 SDHCQ99643 169 aaPredicted RBP16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 C1orf198Q9H425 327 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 ABCB10Q9NRK6 738 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 PRSS50Q9UI38 385 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 DAPK2Q9UIK4 370 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 A0A1W2PPK0 400 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 A0A1W2PPL8 197 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 FABP12A6NFH5 140 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 DHHO43323 396 aa16.47■□□□□ 0.23
EXOSC3-201ENST00000327304 SRSF10O75494 262 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms