RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 C5AR1P21730 350 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 ELAVL1Q15717 326 aaKnown RBP16.06■□□□□ 0.16
PRKCB-202ENST00000321728 NUBPLQ8TB37 319 aa16.06■□□□□ 0.16
PRKCB-202ENST00000321728 S100A8P05109 93 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 GUSBP08236 651 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 PTAFRP25105 342 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 PPT1P50897 306 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 ECH1Q13011 328 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 CD226Q15762 336 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 TEX30Q5JUR7 227 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 SLC29A4Q7RTT9 530 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 LIPHQ8WWY8 451 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 ASB17Q8WXJ9 295 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 OR1E3Q8WZA6 343 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 TSACCQ96A04 125 aaPredicted RBP16.05■□□□□ 0.16
PRKCB-202ENST00000321728 FAM46BQ96A09 425 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 SMCO4Q9NRQ5 59 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 MSGN1A6NI15 193 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 RNASEK-C17orf49H0YIS7 233 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 IFI6P09912 130 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 MAOAP21397 527 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 ABCD3P28288 659 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 AKR1C3P42330 323 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 CAV2P51636 162 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 RIDAP52758 137 aaKnown RBP16.05■□□□□ 0.16
PRKCB-202ENST00000321728 SGCAQ16586 387 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 PNLIPRP3Q17RR3 467 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 EIF2S3LQ2VIR3 472 aaKnown RBP16.05■□□□□ 0.16
PRKCB-202ENST00000321728 C2orf27AQ580R0 203 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 NAA40Q86UY6 237 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 ZNF440Q8IYI8 595 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 OR4D6Q8NGJ1 314 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 ZNF563Q8TA94 476 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 MARCH1Q8TCQ1 289 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 AQP3Q92482 292 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 TAAR8Q969N4 342 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 FBXO17Q96EF6 278 aa16.05■□□□□ 0.16
PRKCB-202ENST00000321728 TBC1D3DA0A087WVF3 549 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 POM121BA6NF01 834 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 TBC1D3LB9A6J9 549 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 H0YIZ8 118 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 LDLRAD4O15165 306 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 KAT7O95251 611 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 ADH1BP00325 375 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 TBC1D3HP0C7X1 549 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 IGFBP3P17936 291 aaPredicted RBP16.04■□□□□ 0.16
PRKCB-202ENST00000321728 TBC1D3CQ6IPX1 549 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 FAHD2BQ6P2I3 314 aaPredicted RBP16.04■□□□□ 0.16
PRKCB-202ENST00000321728 DRAM2Q6UX65 266 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 ETV3LQ6ZN32 361 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 TBC1D3Q8IZP1 549 aaPredicted RBP16.04■□□□□ 0.16
PRKCB-202ENST00000321728 C16orf52Q8NHV5 167 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 FAHD2AQ96GK7 314 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 GDF2Q9UK05 429 aaPredicted RBP16.04■□□□□ 0.16
PRKCB-202ENST00000321728 TGFBR3LH3BV60 316 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 SLC16A7O60669 478 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 PMP2P02689 132 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 HNRNPA1P09651 372 aaKnown RBP eCLIP16.04■□□□□ 0.162e-6■■□□□ 14.5
PRKCB-202ENST00000321728 ST6GAL1P15907 406 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 F2RL1P55085 397 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 CYCSP99999 105 aaKnown RBP16.04■□□□□ 0.16
PRKCB-202ENST00000321728 ERV3-1Q14264 604 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 FAM76BQ5HYJ3 339 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 PHF19Q5T6S3 580 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 TANGO2Q6ICL3 276 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 PATE1Q8WXA2 126 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 CLCC1Q96S66 551 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 NMES1Q9C002 83 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 PCDHGA1Q9Y5H4 931 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 ARID1AO14497 2285 aa16.04■□□□□ 0.16
PRKCB-202ENST00000321728 TRBV6-7A0A0A0MS04 114 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 MEGF11A6BM72 1044 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 WIPF3A6NGB9 483 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 CX3CR1P49238 355 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 BIKQ13323 160 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 DEFB110Q30KQ9 67 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 ZNF260Q3ZCT1 412 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 KCTD18Q6PI47 426 aaPredicted RBP16.03■□□□□ 0.16
PRKCB-202ENST00000321728 FAM219AQ8IW50 185 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 BHLHE23Q8NDY6 225 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 SEC61A2Q9H9S3 476 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 EMC9Q9Y3B6 208 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 NUDT21O43809 227 aaKnown RBP16.03■□□□□ 0.16
PRKCB-202ENST00000321728 CD80P33681 288 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 CCINQ13939 588 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 MARCH3Q86UD3 253 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 CATSPERDQ86XM0 798 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 FRMD1Q8N878 549 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 BAHD1Q8TBE0 780 aaPredicted RBP16.03■□□□□ 0.16
PRKCB-202ENST00000321728 METTL21AQ8WXB1 218 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 RSC1A1Q92681 617 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 ZNF524Q96C55 264 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 FN3KRPQ9HA64 309 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 HHLA2Q9UM44 414 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 LRP12Q9Y561 859 aa16.03■□□□□ 0.16
PRKCB-202ENST00000321728 C5orf52A6NGY3 159 aa16.02■□□□□ 0.16
PRKCB-202ENST00000321728 DBX1A6NMT0 343 aa16.02■□□□□ 0.16
PRKCB-202ENST00000321728 RAB27BO00194 218 aa16.02■□□□□ 0.16
PRKCB-202ENST00000321728 HCRTR1O43613 425 aa16.02■□□□□ 0.16
PRKCB-202ENST00000321728 MED6O75586 246 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 258.7 ms