RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 CT45A8P0DMV1 189 aa14.64□□□□□ -0.07
CACFD1-202ENST00000316948 CT45A9P0DMV2 189 aa14.64□□□□□ -0.07
CACFD1-202ENST00000316948 RAB5BP61020 215 aa14.64□□□□□ -0.07
CACFD1-202ENST00000316948 GPM6BQ13491 265 aa14.64□□□□□ -0.07
CACFD1-202ENST00000316948 HABP2Q14520 560 aaPredicted RBP14.64□□□□□ -0.07
CACFD1-202ENST00000316948 MEF2DQ14814 521 aa14.64□□□□□ -0.07
CACFD1-202ENST00000316948 CT45A2Q5DJT8 189 aa14.64□□□□□ -0.07
CACFD1-202ENST00000316948 PARM1Q6UWI2 310 aa14.64□□□□□ -0.07
CACFD1-202ENST00000316948 ZSCAN4Q8NAM6 433 aaPredicted RBP14.64□□□□□ -0.07
CACFD1-202ENST00000316948 BHLHE23Q8NDY6 225 aa14.64□□□□□ -0.07
CACFD1-202ENST00000316948 DMBX1Q8NFW5 382 aa14.64□□□□□ -0.07
CACFD1-202ENST00000316948 NUDT9Q9BW91 350 aa14.64□□□□□ -0.07
CACFD1-202ENST00000316948 ACKR4Q9NPB9 350 aa14.64□□□□□ -0.07
CACFD1-202ENST00000316948 NIT2Q9NQR4 276 aa14.64□□□□□ -0.07
CACFD1-202ENST00000316948 TEX13DA0A0J9YY54 714 aaPredicted RBP14.63□□□□□ -0.07
CACFD1-202ENST00000316948 MSGN1A6NI15 193 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 F8VVB4 439 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 F8VWA3 439 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 FOXS1O43638 330 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 LMX1BO60663 402 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 ASAH2BP0C7U1 165 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 CFPP27918 469 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 RAB38P57729 211 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 SMCO1Q147U7 214 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 ELAVL1Q15717 326 aaKnown RBP14.63□□□□□ -0.07
CACFD1-202ENST00000316948 ALG11Q2TAA5 492 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 MST1LQ2TV78 715 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 WBP2NLQ6ICG8 309 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 ATG4DQ86TL0 474 aaPredicted RBP14.63□□□□□ -0.07
CACFD1-202ENST00000316948 MARCH3Q86UD3 253 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 HOXB13Q92826 284 aaPredicted RBP14.63□□□□□ -0.07
CACFD1-202ENST00000316948 RNF126Q9BV68 326 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 PRMT8Q9NR22 394 aaPredicted RBP14.63□□□□□ -0.07
CACFD1-202ENST00000316948 CYTL1Q9NRR1 136 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 RCC2Q9P258 522 aaKnown RBP14.63□□□□□ -0.07
CACFD1-202ENST00000316948 MRPS33Q9Y291 106 aaKnown RBP14.63□□□□□ -0.07
CACFD1-202ENST00000316948 A0A0A6YYC8 382 aaPredicted RBP14.63□□□□□ -0.07
CACFD1-202ENST00000316948 COLCA2A8K830 154 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 C2orf74A8MZ97 194 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 I3L1I5 382 aaPredicted RBP14.63□□□□□ -0.07
CACFD1-202ENST00000316948 EIF1AYO14602 144 aaKnown RBP14.63□□□□□ -0.07
CACFD1-202ENST00000316948 IL2RAP01589 272 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 CA3P07451 260 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 FAM157CP0CG43 387 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 HLA-GP17693 338 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 NTSR1P30989 418 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 EIF1AXP47813 144 aaKnown RBP14.63□□□□□ -0.07
CACFD1-202ENST00000316948 ZNF542PQ5EBM4 170 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 ZNF679Q8IYX0 411 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 OR13C3Q8NGS6 347 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 C14orf79Q96F83 325 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 GSN-AS1Q9NRJ2 163 aa14.63□□□□□ -0.07
CACFD1-202ENST00000316948 A0A1W2PQF6 199 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 WIPF3A6NGB9 483 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 H0YIZ8 118 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 XKRYO14609 159 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 EFSO43281 561 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 PMP2P02689 132 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 IFNA6P05013 189 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 S100A6P06703 90 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 SFTA3P0C7M3 94 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 HOXB2P14652 356 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 PPT1P50897 306 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 TOMM20Q15388 145 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 PARGQ86W56 976 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 OR4D6Q8NGJ1 314 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 C16orf52Q8NHV5 167 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 ZNF563Q8TA94 476 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 TAAR8Q969N4 342 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 TCEAL2Q9H3H9 227 aaPredicted RBP14.62□□□□□ -0.07
CACFD1-202ENST00000316948 VPS13AQ96RL7 3174 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 SLC16A7O60669 478 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 PNMTP11086 282 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 C1QL3Q5VWW1 255 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 TAF8Q7Z7C8 310 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 RTN4RL2Q86UN3 420 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 MARCH1Q8TCQ1 289 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 RNF128Q8TEB7 428 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 THRSPQ92748 146 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 FAM131CQ96AQ9 280 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 SLC25A36Q96CQ1 311 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 ARID1AO14497 2285 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 PHYHO14832 338 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 TXNDC12O95881 172 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 CELA2BP08218 269 aaPredicted RBP14.62□□□□□ -0.07
CACFD1-202ENST00000316948 ARRB1P49407 418 aaPredicted RBP14.62□□□□□ -0.07
CACFD1-202ENST00000316948 BTG2P78543 158 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 SLC18B1Q6NT16 456 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 NAA40Q86UY6 237 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 RSC1A1Q92681 617 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 ZC3H10Q96K80 434 aaKnown RBP14.62□□□□□ -0.07
CACFD1-202ENST00000316948 LPAR3Q9UBY5 353 aa14.62□□□□□ -0.07
CACFD1-202ENST00000316948 A0A0J9YY10 115 aa14.61□□□□□ -0.07
CACFD1-202ENST00000316948 SGCAQ16586 387 aa14.61□□□□□ -0.07
CACFD1-202ENST00000316948 OR6S1Q8NH40 331 aa14.61□□□□□ -0.07
CACFD1-202ENST00000316948 CLCC1Q96S66 551 aa14.61□□□□□ -0.07
CACFD1-202ENST00000316948 FN3KRPQ9HA64 309 aa14.61□□□□□ -0.07
CACFD1-202ENST00000316948 EMC9Q9Y3B6 208 aa14.61□□□□□ -0.07
CACFD1-202ENST00000316948 PCDHGA1Q9Y5H4 931 aa14.61□□□□□ -0.07
CACFD1-202ENST00000316948 RNASEK-C17orf49H0YIS7 233 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms