RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 DOCK10Q96BY6 2186 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 A0A1B0GW64 132 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 OR6C76A6NM76 312 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 PATE3B3GLJ2 98 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 TOR1AO14656 332 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 TIAF1O95411 115 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 SERPINA3P01011 423 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 IGHV2-5P01817 119 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 PRF1P14222 555 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 PTGFRP43088 359 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 CCR4P51679 360 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 TPD52P55327 224 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-201ENST00000315544 ERVK-25P63136 954 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 SFRP4Q6FHJ7 346 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-201ENST00000315544 Q8N7P7 452 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 OR6M1Q8NGM8 313 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 ADAMTS15Q8TE58 950 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-201ENST00000315544 ZNF845Q96IR2 970 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-201ENST00000315544 AQP10Q96PS8 301 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 PSMG3-AS1Q96PY0 264 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 SYT3Q9BQG1 590 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 SCPEP1Q9HB40 452 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 EQTNQ9NQ60 294 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 FAM8A1Q9UBU6 413 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 LOC100289279A0A1B0GTE1 492 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 MED19A0JLT2 244 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-201ENST00000315544 J3QLW9 94 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 GDF9O60383 454 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 CD3DP04234 171 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 ZNF19P17023 458 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 NFYAP23511 347 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-201ENST00000315544 RAB25P57735 213 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 PPIAP62937 165 aaKnown RBP6.88□□□□□ -1.31
CNOT4-201ENST00000315544 PITPNAQ00169 270 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 SLC3A1Q07837 685 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 SHEQ5VZ18 495 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 ARL9Q6T311 187 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 ACBD4Q8NC06 268 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 OR1J2Q8NGS2 313 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 OR8K3Q8NH51 312 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 OR1L3Q8NH93 324 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 SLC46A1Q96NT5 459 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 ERMAPQ96PL5 475 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-201ENST00000315544 CDC6Q99741 560 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 SPRTNQ9H040 489 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-201ENST00000315544 POFUT1Q9H488 388 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 STARD10Q9Y365 291 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 MMACHCQ9Y4U1 282 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 TET2Q6N021 2002 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-201ENST00000315544 TBC1D3DA0A087WVF3 549 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 LIPT2A6NK58 231 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 TBC1D3LB9A6J9 549 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 C5orf58C9J3I9 102 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 ACOT7O00154 380 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 NUDT21O43809 227 aaKnown RBP6.88□□□□□ -1.31
CNOT4-201ENST00000315544 SERPINI2O75830 405 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 CEACAM4O75871 244 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 TBC1D3HP0C7X1 549 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 SSTR2P30874 369 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 RECQLP46063 649 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-201ENST00000315544 CLDN12P56749 244 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 ID2Q02363 134 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 ENDOGQ14249 297 aaKnown RBP6.88□□□□□ -1.31
CNOT4-201ENST00000315544 TBC1D3CQ6IPX1 549 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 ZNF550Q7Z398 422 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 CCDC28AQ8IWP9 274 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 ZNF440Q8IYI8 595 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 TBC1D3Q8IZP1 549 aaPredicted RBP6.88□□□□□ -1.31
CNOT4-201ENST00000315544 ZDHHC22Q8N966 263 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 BBS4Q96RK4 519 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 SLC25A18Q9H1K4 315 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 KLHL28Q9NXS3 571 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 R4GMQ9 66 aa6.88□□□□□ -1.31
CNOT4-201ENST00000315544 TRAV6A0A075B6T7 132 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 TRBV2A0A0J9YWF9 115 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 MSGN1A6NI15 193 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 COLCA2A8K830 154 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 OR8G3PP0DMU2 310 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 ANXA11P50995 505 aaKnown RBP6.87□□□□□ -1.31
CNOT4-201ENST00000315544 TRA2AQ13595 282 aaKnown RBP eCLIP6.87□□□□□ -1.31
CNOT4-201ENST00000315544 RBMS2Q15434 407 aaKnown RBP6.87□□□□□ -1.31
CNOT4-201ENST00000315544 NKPD1Q17RQ9 610 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 NANOGNBQ7Z5D8 188 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 GABRG1Q8N1C3 465 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 ADAD2Q8NCV1 583 aaKnown RBP6.87□□□□□ -1.31
CNOT4-201ENST00000315544 OR6C4Q8NGE1 309 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 OR14K1Q8NGZ2 314 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 ZNF431Q8TF32 576 aaPredicted RBP6.87□□□□□ -1.31
CNOT4-201ENST00000315544 SKA2Q8WVK7 121 aaPredicted RBP6.87□□□□□ -1.31
CNOT4-201ENST00000315544 ABHD6Q9BV23 337 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 DDA1Q9BW61 102 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 NMES1Q9C002 83 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 CNTD2Q9H8S5 307 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 LRRC72A6NJI9 287 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 SNTNA6NMZ2 147 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 CYC1P08574 325 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 P0C879 139 aa6.87□□□□□ -1.31
CNOT4-201ENST00000315544 SPTBP11277 2137 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms