RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 TRAF3IP2O43734 574 aaPredicted RBP5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 CXCL13O43927 109 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 CD3DP04234 171 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 CALCBP10092 127 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 CCNOP22674 350 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 GDF1P27539 372 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 CSNK1A1P48729 337 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 BLVRAP53004 296 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 ZNF121P58317 390 aaPredicted RBP5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 GABREP78334 506 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 FAPQ12884 760 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 C17orf107Q6ZR85 190 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 TMPPEQ6ZT21 453 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 Q6ZTK2 550 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 BIVMQ86UB2 503 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 CATSPERDQ86XM0 798 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 DTWD2Q8NBA8 298 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 OR8H1Q8NGG4 311 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 OR4D6Q8NGJ1 314 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 OR51S1Q8NGJ8 323 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 OR2T35Q8NGX2 323 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 ST7LQ8TDW4 575 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 CT55Q8WUE5 264 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 DEDD2Q8WXF8 326 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 LIN37Q96GY3 246 aaPredicted RBP5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 THOC3Q96J01 351 aaKnown RBP5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 ZNF416Q9BWM5 594 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 PBOV1Q9GZY1 135 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 METTL17Q9H7H0 456 aaPredicted RBP5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 MOV10Q9HCE1 1003 aaKnown RBP5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 GPR84Q9NQS5 396 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 P4HTMQ9NXG6 502 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 PLEK2Q9NYT0 353 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 NXT1Q9UKK6 140 aaKnown RBP5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 TCFL5Q9UL49 500 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 MUC6Q6W4X9 2439 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 TPRP12270 2363 aaKnown RBP5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 A0A0J9YW62 118 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 TMEM272A0A1B0GTI8 110 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 A0A1W2PP11 408 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 OR5H15A6NDH6 313 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 GGT3PA6NGU5 568 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 C19orf67A6NJJ6 358 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 FAM166BA8MTA8 275 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 GABARAPH6UMI1 98 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 ACOT7O00154 380 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 CTAG2O75638 210 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 GAAP10253 952 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 PSMB1P20618 241 aaKnown RBP5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 PTBP1P26599 531 aaKnown RBP eCLIP5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 MSX1P28360 303 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 PRSS3P35030 304 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 KLF9Q13886 244 aaPredicted RBP5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 SLC22A6Q4U2R8 563 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 C4orf46Q504U0 113 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 AWAT2Q6E213 333 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 IL22RA1Q8N6P7 574 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 NOXO1Q8NFA2 376 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 OR10K1Q8NGX5 313 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 ZNF431Q8TF32 576 aaPredicted RBP5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 NUDCD2Q8WVJ2 157 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 TMEM41AQ96HV5 264 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 PRMT8Q9NR22 394 aaPredicted RBP5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 NPAP1Q9NZP6 1156 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 FOXJ2Q9P0K8 574 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 NUBP2Q9Y5Y2 271 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 LHFPL6Q9Y693 200 aa5.37□□□□□ -1.55
TNFSF4-201ENST00000281834 A0A1W2PPC1 479 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 M0R296 226 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 NTN3O00634 580 aaPredicted RBP5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 ZNF208O43345 1280 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 TLX3O43711 291 aaPredicted RBP5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 ZNF432O94892 652 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 MPIG6BO95866 241 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 IGF2P01344 180 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 TTRP02766 147 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 RAB40ALP0C0E4 278 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 NAGAP17050 411 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 SUMO3P55854 103 aaPredicted RBP5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 AP3S2P59780 193 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 MC2RQ01718 297 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 ZFP36L1Q07352 338 aaKnown RBP5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 RIN1Q13671 783 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 CDK10Q15131 360 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 EXT1Q16394 746 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 ATP1A1-AS1Q5TC04 95 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 TIGD3Q6B0B8 471 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 TMEM81Q6P7N7 255 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 C5orf46Q6UWT4 87 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 C6orf15Q6UXA7 325 aaPredicted RBP5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 BPHLQ86WA6 291 aaPredicted RBP5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 BEST3Q8N1M1 668 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 GVQW1Q8N7I0 195 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 OR4C16Q8NGL9 310 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 OR10S1Q8NGN2 331 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 TNFAIP8L1Q8WVP5 186 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 RAB40AQ8WXH6 277 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 PHYHIPQ92561 330 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 DOCK10Q96BY6 2186 aa5.36□□□□□ -1.55
TNFSF4-201ENST00000281834 WDR89Q96FK6 387 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms