RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 PRR19A6NJB7 356 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 SLC25A4P12235 298 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 RCC1P18754 421 aaPredicted RBP11.59□□□□□ -0.55
COL8A1-202ENST00000273342 S100A10P60903 97 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 RIPPLY1Q0D2K3 151 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 PEA15Q15121 130 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 EEF1A1P5Q5VTE0 462 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 WBP2NLQ6ICG8 309 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 ATG4DQ86TL0 474 aaPredicted RBP11.59□□□□□ -0.55
COL8A1-202ENST00000273342 YAF2Q8IY57 180 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 OR51F2Q8NH61 342 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 TOX2Q96NM4 488 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 G6PC3Q9BUM1 346 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 RSRP1Q9BUV0 290 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 ABHD6Q9BV23 337 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 OR5AC2Q9NZP5 309 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 YBX2Q9Y2T7 364 aaKnown RBP11.59□□□□□ -0.55
COL8A1-202ENST00000273342 LRP12Q9Y561 859 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 TMEM14AQ9Y6G1 99 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 FANCMQ8IYD8 2048 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 TRANK1O15050 2925 aa11.59□□□□□ -0.55
COL8A1-202ENST00000273342 A0A1B0GV50 99 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 RAB19A4D1S5 217 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 NPIPB9F8W1W9 429 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 ASAH2BP0C7U1 165 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 CD1CP29017 333 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 RUNX3Q13761 415 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 ACKR1Q16570 336 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 COX15Q7KZN9 410 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 GALNTL5Q7Z4T8 443 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 ADGRE4PQ86SQ3 457 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 SLC25A42Q86VD7 318 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 ZNF679Q8IYX0 411 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 RNF141Q8WVD5 230 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 RSC1A1Q92681 617 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 SMIM3Q9BZL3 60 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 PTGES2Q9H7Z7 377 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 FN3KRPQ9HA64 309 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 RHOFQ9HBH0 211 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 POLE3Q9NRF9 147 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 MRPL22Q9NWU5 206 aaKnown RBP11.58□□□□□ -0.56
COL8A1-202ENST00000273342 TXNL1O43396 289 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 FOXS1O43638 330 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 HTR3BO95264 441 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 S100A6P06703 90 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 CRHP06850 196 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 CA3P07451 260 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 H2AFB1P0C5Y9 115 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 EGR3Q06889 387 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 EBPQ15125 230 aaKnown RBP11.58□□□□□ -0.56
COL8A1-202ENST00000273342 DHRS7BQ6IAN0 325 aaPredicted RBP11.58□□□□□ -0.56
COL8A1-202ENST00000273342 PTCRAQ6ISU1 281 aaPredicted RBP11.58□□□□□ -0.56
COL8A1-202ENST00000273342 UQCC3Q6UW78 93 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 CLEC9AQ6UXN8 241 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 PRSS58Q8IYP2 241 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 BAHD1Q8TBE0 780 aaPredicted RBP11.58□□□□□ -0.56
COL8A1-202ENST00000273342 FGGYQ96C11 551 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 PHYHIPLQ96FC7 376 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 CLCC1Q96S66 551 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 LMF2Q9BU23 707 aaKnown RBP11.58□□□□□ -0.56
COL8A1-202ENST00000273342 PLA2G2FQ9BZM2 168 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 OR11A1Q9GZK7 315 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 OR8D2Q9GZM6 311 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 LAT2Q9GZY6 243 aa11.58□□□□□ -0.56
COL8A1-202ENST00000273342 PRMT8Q9NR22 394 aaPredicted RBP11.58□□□□□ -0.56
COL8A1-202ENST00000273342 PNO1Q9NRX1 252 aaKnown RBP11.58□□□□□ -0.56
COL8A1-202ENST00000273342 COA3Q9Y2R0 106 aaPredicted RBP11.58□□□□□ -0.56
COL8A1-202ENST00000273342 URB1O60287 2271 aaKnown RBP11.57□□□□□ -0.56
COL8A1-202ENST00000273342 A0A1B0GTQ1 180 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 LOC107986453A0A1B0GWG9 222 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 MED19A0JLT2 244 aaPredicted RBP11.57□□□□□ -0.56
COL8A1-202ENST00000273342 C9JQL5 133 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 RORAP35398 523 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 RIDAP52758 137 aaKnown RBP11.57□□□□□ -0.56
COL8A1-202ENST00000273342 RAB38P57729 211 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 FMODQ06828 376 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 SMCO1Q147U7 214 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 SGCAQ16586 387 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 SLC18B1Q6NT16 456 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 ZNF813Q6ZN06 617 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 SLC43A2Q8N370 569 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 MITD1Q8WV92 249 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 MAFIPQ8WZ33 124 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 GAS2L1Q99501 681 aaPredicted RBP11.57□□□□□ -0.56
COL8A1-202ENST00000273342 NICN1Q9BSH3 213 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 RNF126Q9BV68 326 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 CNTD2Q9H8S5 307 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 PRTFDC1Q9NRG1 225 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 RPH3AQ9Y2J0 694 aaPredicted RBP11.57□□□□□ -0.56
COL8A1-202ENST00000273342 A0A1W2PPE3 182 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 EFSO43281 561 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 LRP3O75074 770 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 FABP1P07148 127 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 SFTA3P0C7M3 94 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 CXCR1P25024 350 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 ADH6P28332 368 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 F2RL1P55085 397 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 GPR119Q8TDV5 335 aa11.57□□□□□ -0.56
COL8A1-202ENST00000273342 GPX7Q96SL4 187 aaPredicted RBP11.57□□□□□ -0.56
COL8A1-202ENST00000273342 PRRT1Q99946 306 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms