RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 SLC5A6Q9Y289 635 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 CEP192Q8TEP8 1941 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 TMED7-TICAM2A0A0A6YYA0 188 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 MS4A18H0YCH9 400 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 ZNF432O94892 652 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 NMBP08949 121 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 ZNF735P0CB33 412 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 FBXW4P57775 412 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 ELOCQ15369 112 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 NSDHLQ15738 373 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 MS4A18Q3C1V0 323 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 SPAG16Q8N0X2 631 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 ST7LQ8TDW4 575 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 TMPRSS13Q9BYE2 586 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 TXNIPQ9H3M7 391 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 EPHA6Q9UF33 1036 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 COA3Q9Y2R0 106 aaPredicted RBP9.05□□□□□ -0.96
COPB1-201ENST00000249923 TMED7Q9Y3B3 224 aa9.05□□□□□ -0.96
COPB1-201ENST00000249923 TRAV14DV4A0A0A6YYC5 116 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 A0A0B4J2A0 478 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 A0A1W2PQD3 144 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 SHISA8B8ZZ34 492 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 CD38P28907 300 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 DLX5P56178 289 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 S100A10P60903 97 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 PLCXD2Q0VAA5 305 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 CDNFQ49AH0 187 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 SLC22A6Q4U2R8 563 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 KRBOX4Q5JUW0 171 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 GLYATL3Q5SZD4 288 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 C1orf140Q5VVS0 124 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 SYT13Q7L8C5 426 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 SLC16A13Q7RTY0 426 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 LINC00346Q8IVM7 164 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 INO80EQ8NBZ0 244 aaPredicted RBP9.04□□□□□ -0.96
COPB1-201ENST00000249923 CMSS1Q9BQ75 279 aaKnown RBP9.04□□□□□ -0.96
COPB1-201ENST00000249923 C20orf24Q9BUV8 137 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 TINAGL1Q9GZM7 467 aaPredicted RBP9.04□□□□□ -0.96
COPB1-201ENST00000249923 CHRNA10Q9GZZ6 450 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 CENPMQ9NSP4 180 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 FAM86C1Q9NVL1 165 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 SHPKQ9UHJ6 478 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 MMACHCQ9Y4U1 282 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 LOC100289279A0A1B0GTE1 492 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 KRBOX1C9JBD0 128 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 IGHMP01871 453 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 HIST1H2ABP04908 130 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 IL12BP29460 328 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 SCAND1P57086 179 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 COX15Q7KZN9 410 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 HIST3H2AQ7L7L0 130 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 KRT77Q7Z794 578 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 SLC38A9Q8NBW4 561 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 PXT1Q8NFP0 134 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 OR2AK2Q8NG84 335 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 OR4D6Q8NGJ1 314 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 OR1N1Q8NGS0 311 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 OIT3Q8WWZ8 545 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 HIST1H2ACQ93077 130 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 PELOQ9BRX2 385 aaKnown RBP9.04□□□□□ -0.96
COPB1-201ENST00000249923 ELL3Q9HB65 397 aaPredicted RBP9.04□□□□□ -0.96
COPB1-201ENST00000249923 KLK13Q9UKR3 277 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 MFSD2BA6NFX1 497 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 ITGB2P05107 769 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 DLSTP36957 453 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 RAP2BP61225 183 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 ZNF273Q14593 569 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 GPAT4Q86UL3 456 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 SLC41A2Q96JW4 573 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 C1orf198Q9H425 327 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 EMC9Q9Y3B6 208 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 TMEM14AQ9Y6G1 99 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 CACNA1DQ01668 2161 aa9.04□□□□□ -0.96
COPB1-201ENST00000249923 IGHV1OR21-1A0A087WYE8 117 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 D6RAR5 112 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 M0R036 132 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 EFNA2O43921 213 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 FBXO24O75426 580 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 IFNA6P05013 189 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 GIMD1P0DJR0 217 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 PI3P19957 117 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 SLC6A8P48029 635 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 RAB11BQ15907 218 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 RGS7BPQ6MZT1 257 aaPredicted RBP9.03□□□□□ -0.96
COPB1-201ENST00000249923 OGFOD3Q6PK18 319 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 MAMDC2Q7Z304 686 aaPredicted RBP9.03□□□□□ -0.96
COPB1-201ENST00000249923 SLC26A10Q8NG04 563 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 NKX6-2Q9C056 277 aaPredicted RBP9.03□□□□□ -0.96
COPB1-201ENST00000249923 WDR13Q9H1Z4 485 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 CHRDQ9H2X0 955 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 POFUT1Q9H488 388 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 ASPMQ8IZT6 3477 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 ADAMTS9Q9P2N4 1935 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 XKRYO14609 159 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 HLA-AP01891 365 aaKnown RBP9.03□□□□□ -0.96
COPB1-201ENST00000249923 KCNJ3P48549 501 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 SPOCK1Q08629 439 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 SMCO1Q147U7 214 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 COL19A1Q14993 1142 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 GABRG1Q8N1C3 465 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms