RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Gabra3P26049 492 aa11.28□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Tbx4P70325 552 aa11.28□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Hist1h3bP84228 136 aa11.28□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Lin28bQ45KJ6 247 aaKnown RBP11.28□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Ltbp3Q61810 1268 aa11.28□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Adam20Q7M763 760 aa11.28□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Tas2r135Q7TQA9 312 aa11.28□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Olfr527Q7TRT9 305 aa11.28□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 ClmQ7TSN2 230 aa11.28□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Nhlrc3Q8CCH2 347 aa11.28□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Necab3Q9D6J4 353 aa11.28□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Rep15Q9D7T1 230 aa11.28□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Galnt16Q9JJ61 558 aa11.28□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Tagln2Q9WVA4 199 aaKnown RBP11.28□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Gm29797A0A140LIA7 188 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Vmn1r157E9Q069 297 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Lrp3E9Q1T6 790 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Vmn1r139E9Q8L6 297 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Vmn1r112G3UY48 297 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Pgam2O70250 253 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Lyg2Q3V1I0 213 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Zfp677Q6PEP4 634 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Dcaf12l2Q8BGW4 469 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Slc25a21Q8BZ09 298 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Sertm1Q8CD78 107 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Alg12Q8VDB2 486 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Olfr836Q8VFJ3 317 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Olfr828Q8VFM8 312 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Olfr525Q8VGL5 309 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Acy3Q91XE4 318 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Ackr4Q924I3 350 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Sfxn1Q99JR1 322 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Glo1Q9CPU0 184 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Commd4Q9CQ02 199 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Tex12Q9CR81 123 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Rpusd4Q9CWX4 377 aaKnown RBP11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 HikeshiQ9DD02 197 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Hsd17b11Q9EQ06 298 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Irak1bp1Q9ESJ7 259 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 AicdaQ9WVE0 198 aa11.27□□□□□ -0.6
Pcdh1-202ENSMUST00000159405 Ighv1-24A0A0A6YY24 117 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Oosp3G5E8D7 195 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Vmn1r159K7N701 305 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 AregP31955 248 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Mtcp1Q60945 107 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Olfr305Q7TS02 319 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Olfr259Q7TS20 312 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Fjx1Q8BQB4 450 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Tbx19Q99ME7 446 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Hint3Q9CPS6 165 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Pex13Q9D0K1 405 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Kiaa0141Q9DCV6 510 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 B4galt6Q9WVK5 382 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Olfr1555-ps1A0A140LHT7 321 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Birc7A2AWP0 285 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Vmn2r16E9Q025 850 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Vmn2r83E9Q0G7 864 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Npffr1E9Q468 432 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Gm8334F7CD45 553 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Olfr574F8VQ18 346 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Defa-rs1P17533 116 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Clec10aP49300 304 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Fut7Q11131 389 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Vmn1r223Q5SSA0 361 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 SrmsQ62270 496 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Arl11Q6P3A9 176 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Olfr1509Q7TQQ0 308 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Olfr645Q7TRQ1 315 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Pcdh19Q80TF3 1145 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Olfr1391Q8VFA4 311 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Pcbd2Q9CZL5 136 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Sec61a2Q9JLR1 476 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Exo1Q9QZ11 837 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 SncgQ9Z0F7 123 aaKnown RBP11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Prss1Q9Z1R9 246 aa11.27□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Fndc10A2A9Q0 223 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Gm14692A2BH01 229 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 E030030I06RikJ3QML9 246 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Bloc1s1O55102 125 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Grap2O89100 322 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 ActbP60710 375 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Actg1P63260 375 aaKnown RBP11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Gm11492Q5ND19 536 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Zfp180Q6NZI9 655 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Agfg1Q8K2K6 561 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Vmn1r85Q8VIB8 308 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Plpp7Q91WB2 271 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Acy1Q99JW2 408 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Mtif3Q9CZD5 276 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Atg101Q9D8Z6 218 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Scn2aA0A0J9YTW6 2006 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 P01735 133 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Spatc1Q148B6 480 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Gal3st2cQ3ULK5 396 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Taar7bQ5QD11 358 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Btn1a1Q62556 524 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 NagpaQ8BJ48 517 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Q8C5S3 137 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Clrn1Q8K445 232 aa11.26□□□□□ -0.61
Pcdh1-202ENSMUST00000159405 Olfr584Q8VGW0 319 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms