RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 ADRA2CP18825 462 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 GSTM3P21266 225 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 TNFAIP6P98066 277 aaPredicted RBP11.77□□□□□ -0.52
LINC00339-211ENST00000641009 CDK5R2Q13319 367 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 ZMAT1Q5H9K5 638 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 DCAF12L2Q5VW00 463 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 GPR139Q6DWJ6 353 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 C1orf94Q6P1W5 598 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 Q6ZR03 302 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 GLB1L2Q8IW92 636 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 NPEPL1Q8NDH3 523 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 OR2Z1Q8NG97 314 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 OR4M2Q8NGB6 313 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 DIRC2Q96SL1 478 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 GPA33Q99795 319 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 NUAK2Q9H093 628 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 FAM107BQ9H098 131 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 VSX1Q9NZR4 365 aaPredicted RBP11.77□□□□□ -0.52
LINC00339-211ENST00000641009 PURGQ9UJV8 347 aaKnown RBP11.77□□□□□ -0.52
LINC00339-211ENST00000641009 SAMD4AQ9UPU9 718 aaKnown RBP11.77□□□□□ -0.52
LINC00339-211ENST00000641009 AURKCQ9UQB9 309 aa11.77□□□□□ -0.52
LINC00339-211ENST00000641009 UNC119BA6NIH7 251 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 KHDRBS3O75525 346 aaKnown RBP11.76□□□□□ -0.53
LINC00339-211ENST00000641009 DBHP09172 617 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 EPHA1P21709 976 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 CDKN2AP42771 156 aaKnown RBP11.76□□□□□ -0.53
LINC00339-211ENST00000641009 ERFP50548 548 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 LCN2P80188 198 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 SLC3A1Q07837 685 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 DBPQ10586 325 aaPredicted RBP11.76□□□□□ -0.53
LINC00339-211ENST00000641009 CCDC92Q53HC0 331 aaPredicted RBP11.76□□□□□ -0.53
LINC00339-211ENST00000641009 ZER1Q7Z7L7 766 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.76□□□□□ -0.53
LINC00339-211ENST00000641009 PEG10Q86TG7 708 aaKnown RBP11.76□□□□□ -0.53
LINC00339-211ENST00000641009 CMBLQ96DG6 245 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 DHRS1Q96LJ7 313 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 TSSK2Q96PF2 358 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 DCLRE1CQ96SD1 692 aaKnown RBP11.76□□□□□ -0.53
LINC00339-211ENST00000641009 FUZQ9BT04 418 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 A0A0A6YYJ9 748 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 OR6C6A6NF89 314 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 DCTN6O00399 190 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 RER1O15258 196 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 PPP1R3DO95685 299 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 KITLGP21583 273 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 PRDX6P30041 224 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 RPS6KA3P51812 740 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 LSM6P62312 80 aaKnown RBP11.76□□□□□ -0.53
LINC00339-211ENST00000641009 SCGB2A2Q13296 93 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 KRT72Q14CN4 511 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 MEP1BQ16820 701 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 SMARCD3Q6STE5 483 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 DPY19L2P2Q6ZN68 376 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 ADCK1Q86TW2 530 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 OR1F12Q8NHA8 337 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 ZNF418Q8TF45 676 aaPredicted RBP11.76□□□□□ -0.53
LINC00339-211ENST00000641009 NPTNQ9Y639 398 aa11.76□□□□□ -0.53
LINC00339-211ENST00000641009 GMNNO75496 209 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 TXNDC12O95881 172 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 IGHV2-70P01814 119 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 SBK2P0C263 348 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 TUBG1P23258 451 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 TNFSF4P23510 183 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 MSX2P35548 267 aaPredicted RBP11.75□□□□□ -0.53
LINC00339-211ENST00000641009 CENPAP49450 140 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 HLXQ14774 488 aaPredicted RBP11.75□□□□□ -0.53
LINC00339-211ENST00000641009 C1QL2Q7Z5L3 287 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 OR5AS1Q8N127 324 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 FANK1Q8TC84 345 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 ITLN1Q8WWA0 313 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 HAVCR1Q96D42 359 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 ERMAPQ96PL5 475 aaPredicted RBP11.75□□□□□ -0.53
LINC00339-211ENST00000641009 GORASP2Q9H8Y8 452 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 KRCC1Q9NPI7 259 aaPredicted RBP11.75□□□□□ -0.53
LINC00339-211ENST00000641009 TUBG2Q9NRH3 451 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 TMEM106BQ9NUM4 274 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 PTTG3PQ9NZH4 202 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 PCDHB10Q9UN67 800 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 POLR1DQ9Y2S0 133 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 LHFPL6Q9Y693 200 aa11.75□□□□□ -0.53
LINC00339-211ENST00000641009 J3QLI3 93 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 SNX3O60493 162 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 GADD45GO95257 159 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 SEMG1P04279 462 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 ZFP36P26651 326 aaKnown RBP11.74□□□□□ -0.53
LINC00339-211ENST00000641009 SPIBQ01892 262 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 KCNMB1Q16558 191 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 CORO6Q6QEF8 472 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 TEX29Q8N6K0 151 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 ZNF283Q8N7M2 679 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 ST7LQ8TDW4 575 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 PTP4A1Q93096 173 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 PYURFQ96I23 114 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 SAMD8Q96LT4 415 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 COG8Q96MW5 612 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 OR2V2Q96R30 315 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 C7orf69Q9H7B7 122 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 OPN4Q9UHM6 478 aa11.74□□□□□ -0.53
LINC00339-211ENST00000641009 IGLV1-36A0A0B4J1U3 117 aa11.73□□□□□ -0.53
LINC00339-211ENST00000641009 RAC2P15153 192 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms