RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-225	ENST00000617087	KRT16	P08779	473 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	TACSTD2	P09758	323 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	NR2C1	P13056	603 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	ATF6	P18850	670 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	MAS1L	P35410	378 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	LONP1	P36776	959 aa	Known RBP	3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	CSNK1D	P48730	415 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	HMGCS1	Q01581	520 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	RSPO1	Q2MKA7	263 aa	Predicted RBP	3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	GPR107	Q5VW38	600 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	C6orf120	Q7Z4R8	191 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	MYOCD	Q8IZQ8	938 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	SPAG16	Q8N0X2	631 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	OR5T3	Q8NGG3	340 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	CREB3L1	Q96BA8	519 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	SEH1L	Q96EE3	360 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	RNF185	Q96GF1	192 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	MICU1	Q9BPX6	476 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	DEFB129	Q9H1M3	183 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	MRM3	Q9HC36	420 aa	Known RBP	3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	CD209	Q9NNX6	404 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	DYRK4	Q9NR20	520 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	CACNG2	Q9Y698	323 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	TDRD6	O60522	2096 aa	Known RBP	3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	IQGAP2	Q13576	1575 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	UGGT2	Q9NYU1	1516 aa		3.75	□□□□□ -1.81
PVT1-225	ENST00000617087	KIF13A	Q9H1H9	1805 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	ADGRA3	Q8IWK6	1321 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	ABCC10	Q5T3U5	1492 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	PRX	Q9BXM0	1461 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	RAPGEF2	Q9Y4G8	1499 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087		A0A1B0GUA9	196 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	CIB4	A0PJX0	185 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	NKX2-6	A6NCS4	301 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	NCBP2L	A6PVI3	153 aa	Known RBP	3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	LAD1	O00515	517 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	XRCC2	O43543	280 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	CHMP2A	O43633	222 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	SPOP	O43791	374 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	TGM6	O95932	706 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	CSTA	P01040	98 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	MB	P02144	154 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	GGT1	P19440	569 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	RAB3B	P20337	219 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	LHX2	P50458	406 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	ZNF138	P52744	262 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	ZNF33A	Q06730	810 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	TCP10	Q12799	353 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	IFT88	Q13099	833 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	POU2AF1	Q16633	256 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	PTPN20	Q4JDL3	420 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	MBOAT2	Q6ZWT7	520 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	BLOC1S5	Q8TDH9	187 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	MITD1	Q8WV92	249 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	GIMAP1	Q8WWP7	306 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	RAB1C	Q92928	201 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	IL22RA2	Q969J5	263 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	TMEM230	Q96A57	120 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	ELSPBP1	Q96BH3	223 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	LZTS2	Q9BRK4	669 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	DIP2B	Q9P265	1576 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	PSG8	Q9UQ74	426 aa		3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	MTCL1	Q9Y4B5	1905 aa	Known RBP	3.74	□□□□□ -1.81
PVT1-225	ENST00000617087	UHRF1BP1L	A0JNW5	1464 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	ARHGAP21	Q5T5U3	1957 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087		A6NDN8	102 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	KLLN	B2CW77	178 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	SS18L1	O75177	396 aa	Predicted RBP	3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	FARS2	O95363	451 aa	Known RBP	3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	RET	P07949	1114 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	STAG3L2	P0CL84	134 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	CSNK2A2	P19784	350 aa	Predicted RBP	3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	RAB4A	P20338	218 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	BMI1	P35226	326 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	CDKN2B	P42772	138 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	CXCL5	P42830	114 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	ETV1	P50549	477 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	LCN2	P80188	198 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	THEM4	Q5T1C6	240 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	TPTE2P1	Q5T6R2	138 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	ULK3	Q6PHR2	472 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	C11orf53	Q8IXP5	236 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	NPW	Q8N729	165 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	OR52E2	Q8NGJ4	325 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	OR51F2	Q8NH61	342 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	PIH1D2	Q8WWB5	315 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	TMEM158	Q8WZ71	300 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	APH1A	Q96BI3	265 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	CDC42EP4	Q9H3Q1	356 aa	Known RBP	3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	CD84	Q9UIB8	345 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	DDX19B	Q9UMR2	479 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	COMMD3-BMI1	R4GMX3	469 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	PIKFYVE	Q9Y2I7	2098 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	KIAA0556	O60303	1618 aa		3.73	□□□□□ -1.81
PVT1-225	ENST00000617087	ABCC2	Q92887	1545 aa		3.72	□□□□□ -1.81
PVT1-225	ENST00000617087	KDM5B	Q9UGL1	1544 aa		3.72	□□□□□ -1.81
PVT1-225	ENST00000617087	TRAV6	A0A075B6T7	132 aa		3.72	□□□□□ -1.81
PVT1-225	ENST00000617087	IGHV3-64D	A0A0J9YX35	117 aa		3.72	□□□□□ -1.81
PVT1-225	ENST00000617087	ERI3	O43414	337 aa	Known RBP	3.72	□□□□□ -1.81
PVT1-225	ENST00000617087	HSBP1	O75506	76 aa		3.72	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms