RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 IER3IP1Q9Y5U9 82 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 UNC79Q9P2D8 2635 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 A0A1W2PQL4 384 aaPredicted RBP7.78□□□□□ -1.16
SMAD4-217ENST00000611848 SHISA3A0PJX4 238 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 TUBAL3A6NHL2 446 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 LRRN3E7EW58 273 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 C16orf97H3BN30 126 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 CASKO14936 926 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 OR6A2O95222 327 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 HIST1H2ABP04908 130 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 APEHP13798 732 aaKnown RBP7.78□□□□□ -1.16
SMAD4-217ENST00000611848 CFL1P23528 166 aaKnown RBP7.78□□□□□ -1.16
SMAD4-217ENST00000611848 KIR2DL3P43628 341 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 MTNR1BP49286 362 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 DEFA1P59665 94 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 DEFA3P59666 94 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 PUDPQ08623 228 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 FAM27E3Q08E93 113 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 P2RY6Q15077 328 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 SLC35D3Q5M8T2 416 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 DDI2Q5TDH0 399 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 DMRTA1Q5VZB9 504 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 FBXW9Q5XUX1 488 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 Q6ZT83 130 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 CREB3L2Q70SY1 520 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 HIST3H2AQ7L7L0 130 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 VASH1Q7L8A9 365 aaPredicted RBP7.78□□□□□ -1.16
SMAD4-217ENST00000611848 GABRG1Q8N1C3 465 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 LRRC75AQ8NAA5 344 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 POMGNT2Q8NAT1 580 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 NPEPL1Q8NDH3 523 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 SDR9C7Q8NEX9 313 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 OR4K13Q8NH42 304 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 HIST1H2ACQ93077 130 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 APH1AQ96BI3 265 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 ITPKCQ96DU7 683 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 TBX5Q99593 518 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 OR10A4Q9H209 315 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 KCNN2Q9H2S1 579 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 KCNN3Q9UGI6 736 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 NDRG3Q9UGV2 375 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 HIF3AQ9Y2N7 669 aa7.78□□□□□ -1.16
SMAD4-217ENST00000611848 NOTCH2Q04721 2471 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 OR6C65A6NJZ3 312 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 E9PI62 339 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 MS4A18H0YCH9 400 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 BOLA2-SMG1P6H3BVE0 249 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 PLPP3O14495 311 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 IMPA2O14732 288 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 OGG1O15527 345 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 SC5DO75845 299 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 TXNDC12O95881 172 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 TFP02787 698 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 MRPL3P09001 348 aaKnown RBP7.77□□□□□ -1.17
SMAD4-217ENST00000611848 OR2T7P0C7T2 308 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 ASAH2BP0C7U1 165 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 SPNP16150 400 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 PPP3CBP16298 524 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 PSMB1P20618 241 aaKnown RBP7.77□□□□□ -1.17
SMAD4-217ENST00000611848 NTF4P34130 210 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 RPL4P36578 427 aaKnown RBP7.77□□□□□ -1.17
SMAD4-217ENST00000611848 PPP3R1P63098 170 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 LGALS3BPQ08380 585 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 DBPQ10586 325 aaPredicted RBP7.77□□□□□ -1.17
SMAD4-217ENST00000611848 ZP4Q12836 540 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 INSL4Q14641 139 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 MS4A18Q3C1V0 323 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 LCN1P1Q5VSP4 162 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 ZNF787Q6DD87 383 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 HIST2H2BCQ6DN03 193 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 DMKNQ6E0U4 476 aaPredicted RBP7.77□□□□□ -1.17
SMAD4-217ENST00000611848 AAED1Q7RTV5 226 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 PXKQ7Z7A4 578 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 UEVLDQ8IX04 471 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 SYS1Q8N2H4 156 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 KDM8Q8N371 416 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 GDPD1Q8N9F7 314 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 ZIC4Q8N9L1 334 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 OR2T27Q8NH04 317 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 MOSPD2Q8NHP6 518 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 FAM222BQ8WU58 562 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 HTRA1Q92743 480 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 C4orf36Q96KX1 117 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 ZNF385AQ96PM9 386 aaKnown RBP7.77□□□□□ -1.17
SMAD4-217ENST00000611848 CNN2Q99439 309 aaKnown RBP7.77□□□□□ -1.17
SMAD4-217ENST00000611848 ATF6BQ99941 703 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 B3GAT1Q9P2W7 334 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 UPB1Q9UBR1 384 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 PRSS50Q9UI38 385 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 TBC1D24Q9ULP9 559 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 RCE1Q9Y256 329 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 ADAM18Q9Y3Q7 739 aa7.77□□□□□ -1.17
SMAD4-217ENST00000611848 SETXQ7Z333 2677 aaKnown RBP7.76□□□□□ -1.17
SMAD4-217ENST00000611848 OR6C68A6NDL8 312 aa7.76□□□□□ -1.17
SMAD4-217ENST00000611848 FABP12A6NFH5 140 aa7.76□□□□□ -1.17
SMAD4-217ENST00000611848 GYPBP06028 91 aa7.76□□□□□ -1.17
SMAD4-217ENST00000611848 CD1AP06126 327 aa7.76□□□□□ -1.17
SMAD4-217ENST00000611848 CD14P08571 375 aa7.76□□□□□ -1.17
SMAD4-217ENST00000611848 EPXP11678 715 aa7.76□□□□□ -1.17
SMAD4-217ENST00000611848 IL7P13232 177 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms