RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 MBD3L4A6NDZ8 208 aaPredicted RBP11.83□□□□□ -0.52
VMP1-217ENST00000593168 MBD3L3A6NE82 208 aaPredicted RBP11.83□□□□□ -0.52
VMP1-217ENST00000593168 MBD3L5A6NJ08 208 aaPredicted RBP11.83□□□□□ -0.52
VMP1-217ENST00000593168 FIGNL2A6NMB9 653 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 PRSS44E7EML9 344 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 PSMD9O00233 223 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 SLC22A1O15245 554 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 EDNRAP25101 427 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 GABRA5P31644 462 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 CRYBB2P43320 205 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 OR3A2P47893 321 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 PER3P56645 1201 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 ROR2Q01974 943 aaKnown RBP11.83□□□□□ -0.52
VMP1-217ENST00000593168 CDK5R1Q15078 307 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 TRAM1Q15629 374 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 CEACAM16Q2WEN9 425 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 FDX2Q6P4F2 183 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 CD200R1LQ6Q8B3 271 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 FAM214BQ7L5A3 538 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 KRT77Q7Z794 578 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 LINC00346Q8IVM7 164 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 ZFP41Q8N8Y5 198 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 MBD3L2Q8NHZ7 208 aaPredicted RBP11.83□□□□□ -0.52
VMP1-217ENST00000593168 RPS4Y2Q8TD47 263 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 RNF133Q8WVZ7 376 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 RNF166Q96A37 237 aaPredicted RBP11.83□□□□□ -0.52
VMP1-217ENST00000593168 MAP6Q96JE9 813 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 FOXB1Q99853 325 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 OR51E2Q9H255 320 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 UPB1Q9UBR1 384 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 GDF2Q9UK05 429 aaPredicted RBP11.83□□□□□ -0.52
VMP1-217ENST00000593168 POLR1DQ9Y2S0 133 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 POLQO75417 2590 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 CACNA1CQ13936 2221 aa11.83□□□□□ -0.52
VMP1-217ENST00000593168 SVILO95425 2214 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 TRDV1A0A1B0GX56 115 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 ZNF587BE7ETH6 402 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 GPRIN2O60269 458 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 GPX5O75715 221 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 ATE1O95260 518 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 CNOT4O95628 575 aaKnown RBP11.82□□□□□ -0.52
VMP1-217ENST00000593168 HLA-DPB1P04440 258 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 TPOP07202 933 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 CST2P09228 141 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 GALP22466 123 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 NR4A1P22736 598 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 DCTDP32321 178 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 OPRL1P41146 370 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 RIDAP52758 137 aaKnown RBP11.82□□□□□ -0.52
VMP1-217ENST00000593168 HIST1H3AP68431 136 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 AQP6Q13520 282 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 ENDOGQ14249 297 aaKnown RBP11.82□□□□□ -0.52
VMP1-217ENST00000593168 C1orf185Q5T7R7 199 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 HIST2H3PS2Q5TEC6 136 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 FBXW9Q5XUX1 488 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 CORO6Q6QEF8 472 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 ARL9Q6T311 187 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 LRRN1Q6UXK5 716 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 RPTNQ6XPR3 784 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 HIST2H3AQ71DI3 136 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 ZNF627Q7L945 461 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.82□□□□□ -0.52
VMP1-217ENST00000593168 ABHD12BQ7Z5M8 362 aaPredicted RBP11.82□□□□□ -0.52
VMP1-217ENST00000593168 SYT9Q86SS6 491 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 MS4A15Q8N5U1 240 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 C9orf106Q8NAJ2 232 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 GJC3Q8NFK1 279 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 RPL3LQ92901 407 aaKnown RBP11.82□□□□□ -0.52
VMP1-217ENST00000593168 SLAMF6Q96DU3 332 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 SMIM19Q96E16 107 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 CHCHD6Q9BRQ6 235 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 ZNF416Q9BWM5 594 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 ASH2LQ9UBL3 628 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 SSR3Q9UNL2 185 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 EMC9Q9Y3B6 208 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 GRIP1Q9Y3R0 1128 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 F8P00451 2351 aa11.82□□□□□ -0.52
VMP1-217ENST00000593168 FREM1Q5H8C1 2179 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 TRBV2A0A0J9YWF9 115 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 PNMA8CA0A1B0GUJ8 204 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 FARS2O95363 451 aaKnown RBP11.81□□□□□ -0.52
VMP1-217ENST00000593168 IGHV3-9P01782 118 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 CRHP06850 196 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 H2BFMP0C1H6 154 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 EDN3P14138 238 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 ABOP16442 354 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 FGF9P31371 208 aaPredicted RBP11.81□□□□□ -0.52
VMP1-217ENST00000593168 TIMP3P35625 211 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 UGT2B10P36537 528 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 PSMB10P40306 273 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 RPS25P62851 125 aaKnown RBP11.81□□□□□ -0.52
VMP1-217ENST00000593168 ALKBH1Q13686 389 aaKnown RBP11.81□□□□□ -0.52
VMP1-217ENST00000593168 RTL6Q6ICC9 239 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 ZNF544Q6NX49 715 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 FJX1Q86VR8 437 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 SLC22A24Q8N4F4 322 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 OR6K3Q8NGY3 331 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 PGLYRP3Q96LB9 341 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 ZFP3Q96NJ6 502 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 NIPAL2Q9H841 368 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms