RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 RPS7P62081 194 aaKnown RBP18.37■□□□□ 0.53
ATG4D-212ENST00000590096 SNRPD2P62316 118 aaKnown RBP18.37■□□□□ 0.53
ATG4D-212ENST00000590096 HIST1H3AP68431 136 aa18.37■□□□□ 0.53
ATG4D-212ENST00000590096 ELFN2Q5R3F8 820 aa18.37■□□□□ 0.53
ATG4D-212ENST00000590096 HIST2H3PS2Q5TEC6 136 aa18.37■□□□□ 0.53
ATG4D-212ENST00000590096 LINC01590Q5TEZ4 76 aa18.37■□□□□ 0.53
ATG4D-212ENST00000590096 C11orf71Q6IPW1 123 aa18.37■□□□□ 0.53
ATG4D-212ENST00000590096 ARL9Q6T311 187 aa18.37■□□□□ 0.53
ATG4D-212ENST00000590096 ZBTB49Q6ZSB9 765 aa18.37■□□□□ 0.53
ATG4D-212ENST00000590096 HIST2H3AQ71DI3 136 aa18.37■□□□□ 0.53
ATG4D-212ENST00000590096 LRRC75A-AS1Q8N1F1 130 aa18.37■□□□□ 0.53
ATG4D-212ENST00000590096 PERPQ96FX8 193 aa18.37■□□□□ 0.53
ATG4D-212ENST00000590096 PLK3Q9H4B4 646 aa18.37■□□□□ 0.53
ATG4D-212ENST00000590096 WDR76Q9H967 626 aa18.37■□□□□ 0.53
ATG4D-212ENST00000590096 PMF1-BGLAPU3KQ54 211 aa18.37■□□□□ 0.53
ATG4D-212ENST00000590096 OR6C6A6NF89 314 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 OVOL3O00110 214 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 SPARCP09486 303 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 GSTT1P30711 240 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 PTH2RP49190 550 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 RCN1Q15293 331 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 EFNB3Q15768 340 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 SLC35D3Q5M8T2 416 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 C12orf73Q69YU5 71 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 RGS7BPQ6MZT1 257 aaPredicted RBP18.36■□□□□ 0.53
ATG4D-212ENST00000590096 TMEM154Q6P9G4 183 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 RTTNQ86VV8 2226 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 PITX2Q99697 317 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 COQ7Q99807 217 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 CACNG6Q9BXT2 260 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 GSX2Q9BZM3 304 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 ELOVL3Q9HB03 270 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 CELSR1Q9NYQ6 3014 aa18.36■□□□□ 0.53
ATG4D-212ENST00000590096 ZNF593O00488 134 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-212ENST00000590096 PRKYO43930 277 aa18.35■□□□□ 0.53
ATG4D-212ENST00000590096 ABHD16AO95870 558 aa18.35■□□□□ 0.53
ATG4D-212ENST00000590096 ANPEPP15144 967 aa18.35■□□□□ 0.53
ATG4D-212ENST00000590096 PAX1P15863 534 aa18.35■□□□□ 0.53
ATG4D-212ENST00000590096 POLR2IP36954 125 aaKnown RBP18.35■□□□□ 0.53
ATG4D-212ENST00000590096 WNT5AP41221 380 aa18.35■□□□□ 0.53
ATG4D-212ENST00000590096 RPS27P42677 84 aaKnown RBP18.35■□□□□ 0.53
ATG4D-212ENST00000590096 SWI5Q1ZZU3 235 aa18.35■□□□□ 0.53
ATG4D-212ENST00000590096 CFAP77Q6ZQR2 320 aa18.35■□□□□ 0.53
ATG4D-212ENST00000590096 ERI1Q8IV48 349 aaKnown RBP18.35■□□□□ 0.53
ATG4D-212ENST00000590096 TCEANCQ8N8B7 351 aa18.35■□□□□ 0.53
ATG4D-212ENST00000590096 BBS1Q8NFJ9 593 aa18.35■□□□□ 0.53
ATG4D-212ENST00000590096 OR1J1Q8NGS3 322 aa18.35■□□□□ 0.53
ATG4D-212ENST00000590096 OR6N2Q8NGY6 317 aa18.35■□□□□ 0.53
ATG4D-212ENST00000590096 MRPL24Q96A35 216 aaKnown RBP18.35■□□□□ 0.53
ATG4D-212ENST00000590096 ZMYND19Q96E35 227 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-212ENST00000590096 C4orf45Q96LM5 186 aa18.35■□□□□ 0.53
ATG4D-212ENST00000590096 INTS14Q96SY0 518 aa18.35■□□□□ 0.53
ATG4D-212ENST00000590096 ZNF701Q9NV72 531 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-212ENST00000590096 FBXO9Q9UK97 447 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-212ENST00000590096 ARID1AO14497 2285 aa18.35■□□□□ 0.53
ATG4D-212ENST00000590096 USF3Q68DE3 2245 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 M0R129 80 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 TLX2O43763 284 aaPredicted RBP18.34■□□□□ 0.53
ATG4D-212ENST00000590096 ATP5J2P56134 94 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 SELENOVP59797 346 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 CDC42P60953 191 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 ECH1Q13011 328 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 APOFQ13790 326 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 TEX30Q5JUR7 227 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 LCN1P1Q5VSP4 162 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 C1orf174Q8IYL3 243 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 ZNF101Q8IZC7 436 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 ABHD4Q8TB40 342 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 TMEM163Q8TC26 289 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 SLC7A6Q92536 515 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 DCLRE1CQ96SD1 692 aaKnown RBP18.34■□□□□ 0.53
ATG4D-212ENST00000590096 ATF6BQ99941 703 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 CXXC4Q9H2H0 198 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 H2AFY2Q9P0M6 372 aaPredicted RBP18.34■□□□□ 0.53
ATG4D-212ENST00000590096 GRIP1Q9Y3R0 1128 aa18.34■□□□□ 0.53
ATG4D-212ENST00000590096 C2CD3Q4AC94 2353 aa18.33■□□□□ 0.53
ATG4D-212ENST00000590096 ICMTO60725 284 aa18.33■□□□□ 0.52
ATG4D-212ENST00000590096 SLC2A5P22732 501 aa18.33■□□□□ 0.52
ATG4D-212ENST00000590096 TRIP10Q15642 601 aa18.33■□□□□ 0.52
ATG4D-212ENST00000590096 PCK2Q16822 640 aa18.33■□□□□ 0.52
ATG4D-212ENST00000590096 MST1LQ2TV78 715 aa18.33■□□□□ 0.52
ATG4D-212ENST00000590096 ZIK1Q3SY52 487 aaPredicted RBP18.33■□□□□ 0.52
ATG4D-212ENST00000590096 SHFQ7M4L6 423 aa18.33■□□□□ 0.52
ATG4D-212ENST00000590096 DCXRQ7Z4W1 244 aa18.33■□□□□ 0.52
ATG4D-212ENST00000590096 MAP6Q96JE9 813 aa18.33■□□□□ 0.52
ATG4D-212ENST00000590096 IL4I1Q96RQ9 567 aa18.33■□□□□ 0.52
ATG4D-212ENST00000590096 SLC29A1Q99808 456 aa18.33■□□□□ 0.52
ATG4D-212ENST00000590096 MRPL37Q9BZE1 423 aaKnown RBP18.33■□□□□ 0.52
ATG4D-212ENST00000590096 MARCH7Q9H992 704 aa18.33■□□□□ 0.52
ATG4D-212ENST00000590096 DUSP13Q9UII6 198 aa18.33■□□□□ 0.52
ATG4D-212ENST00000590096 FZR1Q9UM11 496 aa18.33■□□□□ 0.52
ATG4D-212ENST00000590096 HIVEP1P15822 2718 aa18.32■□□□□ 0.52
ATG4D-212ENST00000590096 SETD2Q9BYW2 2564 aaPredicted RBP18.32■□□□□ 0.52
ATG4D-212ENST00000590096 EVX1P49640 407 aa18.32■□□□□ 0.52
ATG4D-212ENST00000590096 ERVS71-1P61550 626 aa18.32■□□□□ 0.52
ATG4D-212ENST00000590096 ELF3P78545 371 aaPredicted RBP18.32■□□□□ 0.52
ATG4D-212ENST00000590096 EIF2B1Q14232 305 aaKnown RBP18.32■□□□□ 0.52
ATG4D-212ENST00000590096 RFPL4BQ6ZWI9 263 aa18.32■□□□□ 0.52
ATG4D-212ENST00000590096 DPY19L4Q7Z388 723 aa18.32■□□□□ 0.52
ATG4D-212ENST00000590096 SYNPRQ8TBG9 265 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms